Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq20443 98.7 1e-18 seq18576 95.1 1e-17 seq26536 87.8 2e-15 >seq20443 Length=33350 Score = 98.7 bits (108), Expect = 1e-18 Identities = 131/178 (74%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| |||| ||||| | ||| |||| ||||| Sbjct 12761 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTATATATATTAACATGGG 12820 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | |||||| | | | |||| || || | |||| || |||||| | Sbjct 12821 ATAACATTATAGGATTTTTGTCT-TATTACGTTGGCCTTCAGGATCGAAT-TAATGAATA 12878 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 || |||||||||||| | || || || |||| |||||||||| |||||||||| Sbjct 12879 ATTGAGATAGTCGGGGGCATTCGTCTTTCATAGTCAGAGGTGAAATTTTTGGATTTAT 12936 >seq18576 Length=25438 Score = 95.1 bits (104), Expect = 1e-17 Identities = 131/180 (73%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC-TCGAATACATTACCATGGA 72 ||| |||||| ||||||||| | ||||| || |||| || | | |||||||| ||||| Sbjct 10863 TTAATTTGAAGAAATTAGAGTGCTCAAACCAAGCCTATGTGTTGTATACATTAGCATGGG 10804 Query 73 ATAATAGAATAGGACGTGCGGTT--CTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 |||| | ||||||| | || ||||| | | | | ||| || |||||||| Sbjct 10803 ATAACATTATAGGACTTTTTTTTTCCTATTACATTGTTCTTCGGGATCGGA-GTAATGAT 10745 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 || | ||||||| |||||| | ||| | || |||| ||||||||||||| ||||||| Sbjct 10744 TAACAGGGATAGTTGGGGGTATTCGTAGTTCATAGTCAGAGGTGAAATTCTTAGATTTAT 10685 >seq26536 Length=152591 Score = 87.8 bits (96), Expect = 2e-15 Identities = 133/183 (73%), Gaps = 5/183 (3%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAA-TACATTACCA 68 ||| ||| |||||| ||||||||| |||||||||| ||| || | || |||| || Sbjct 102985 ACTATTATTTTGAAGAAATTAGAGTGTTCAAAGCAATCCTACTCTTTATGTAAATTAGCA 103044 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGT-AGGTTTCTAGGACCGCCCGTAAT 127 ||| |||||| |||||| | ||| ||||| || || ||| ||| || ||||| Sbjct 103045 TGGGATAATATTATAGGATTT-CGGCCCTATTACGTTAGCCTTCG-GGATCGAA-GTAAT 103101 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 || | | ||||||| ||||| | ||||| | |||| |||||||||||||| ||| Sbjct 103102 TATTATCAGGGATAGTTGGGGGCATTCGTATTTCGTAGTCAGAGGTGAAATTCTTGAATT 103161 Query 188 TAT 190 ||| Sbjct 103162 TAT 103164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511831989920