Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30]
33,873 sequences; 833,080,760 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq20443 98.7 1e-18
seq18576 95.1 1e-17
seq26536 87.8 2e-15
>seq20443
Length=33350
Score = 98.7 bits (108), Expect = 1e-18
Identities = 131/178 (74%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| |||| ||||| | ||| |||| |||||
Sbjct 12761 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTATATATATTAACATGGG 12820
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | | | |||| || || | |||| || |||||| |
Sbjct 12821 ATAACATTATAGGATTTTTGTCT-TATTACGTTGGCCTTCAGGATCGAAT-TAATGAATA 12878
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
|| |||||||||||| | || || || |||| |||||||||| ||||||||||
Sbjct 12879 ATTGAGATAGTCGGGGGCATTCGTCTTTCATAGTCAGAGGTGAAATTTTTGGATTTAT 12936
>seq18576
Length=25438
Score = 95.1 bits (104), Expect = 1e-17
Identities = 131/180 (73%), Gaps = 4/180 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC-TCGAATACATTACCATGGA 72
||| |||||| ||||||||| | ||||| || |||| || | | |||||||| |||||
Sbjct 10863 TTAATTTGAAGAAATTAGAGTGCTCAAACCAAGCCTATGTGTTGTATACATTAGCATGGG 10804
Query 73 ATAATAGAATAGGACGTGCGGTT--CTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130
|||| | ||||||| | || ||||| | | | | ||| || ||||||||
Sbjct 10803 ATAACATTATAGGACTTTTTTTTTCCTATTACATTGTTCTTCGGGATCGGA-GTAATGAT 10745
Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
|| | ||||||| |||||| | ||| | || |||| ||||||||||||| |||||||
Sbjct 10744 TAACAGGGATAGTTGGGGGTATTCGTAGTTCATAGTCAGAGGTGAAATTCTTAGATTTAT 10685
>seq26536
Length=152591
Score = 87.8 bits (96), Expect = 2e-15
Identities = 133/183 (73%), Gaps = 5/183 (3%)
Strand=Plus/Plus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAA-TACATTACCA 68
||| ||| |||||| ||||||||| |||||||||| ||| || | || |||| ||
Sbjct 102985 ACTATTATTTTGAAGAAATTAGAGTGTTCAAAGCAATCCTACTCTTTATGTAAATTAGCA 103044
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGT-AGGTTTCTAGGACCGCCCGTAAT 127
||| |||||| |||||| | ||| ||||| || || ||| ||| || |||||
Sbjct 103045 TGGGATAATATTATAGGATTT-CGGCCCTATTACGTTAGCCTTCG-GGATCGAA-GTAAT 103101
Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187
|| | | ||||||| ||||| | ||||| | |||| |||||||||||||| |||
Sbjct 103102 TATTATCAGGGATAGTTGGGGGCATTCGTATTTCGTAGTCAGAGGTGAAATTCTTGAATT 103161
Query 188 TAT 190
|||
Sbjct 103162 TAT 103164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511831989920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |