Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30]
33,873 sequences; 833,080,760 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq23463 138 2e-30
seq17432 118 2e-24
seq23279 107 4e-21
seq24894 104 4e-20
seq26676 98.7 2e-18
seq25266 89.7 9e-16
seq23543 89.7 9e-16
seq23664 84.2 4e-14
seq24236 82.4 1e-13
seq25631 77.0 6e-12
seq11852 73.4 7e-11
>seq23463
Length=58650
Score = 138 bits (152), Expect = 2e-30
Identities = 179/243 (74%), Gaps = 11/243 (5%)
Strand=Plus/Plus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| ||||
Sbjct 58401 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAATCGACGAAATGCTTCGGG 58460
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129
|||| | ||| | | | |||||| ||||| |||||| ||| |||| ||| |
Sbjct 58461 GAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGGCAACC------TTTCGAA 58513
Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188
| ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| |||
Sbjct 58514 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 58570
Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248
||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| ||
Sbjct 58571 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 58630
Query 249 CCT 251
|||
Sbjct 58631 CCT 58633
>seq17432
Length=28083
Score = 118 bits (130), Expect = 2e-24
Identities = 174/242 (72%), Gaps = 11/242 (5%)
Strand=Plus/Minus
Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGG 70
|||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||||
Sbjct 869 GTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAATCGACGAAATGCTTCGGGG 810
Query 71 AGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTC 130
||| | ||| | | | |||||| |||| |||||| ||| |||| ||| |
Sbjct 809 AGTT-GAAAATAAGCATAGATCCGGAGATCCCCGAATAGGGCAACC------TTTCAAAC 757
Query 131 ATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTA 189
||| |||||||| ||| |||| |||| | ||| || |||||||||||||| ||||
Sbjct 756 --TGC-TGCTGAATCCATGGGTAGGCAAGATACAACCTGGTGAACTGAAACATCTTAGTA 700
Query 190 GCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGC 249
|| ||||||||||| ||| | |||||| ||||| |||||||||||||||| |||
Sbjct 699 GCCAGAGGAAAAGAAAGCAAAAGTGATTCCTGTAGTAGCGGCGAGCGAAATGGGAGCAGC 640
Query 250 CT 251
||
Sbjct 639 CT 638
>seq23279
Length=56629
Score = 107 bits (118), Expect = 4e-21
Identities = 173/244 (71%), Gaps = 11/244 (5%)
Strand=Plus/Plus
Query 9 TGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG 68
|||||||| ||| ||| | || ||| ||||| | ||||| || | ||| ||
Sbjct 55768 TGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCATAGTAATCGATGAAATGCTTTGG 55827
Query 69 GGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGG 128
||||| | ||| | | | |||| | || || |||||| ||| |||| ||| |
Sbjct 55828 GGAGTTAA-AAATAAGCATAGATCTGGAGCTTCCCGAATAGGGCAACC------TTTCGA 55880
Query 129 TCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAG 187
||||| || ||||| ||| || | |||| || ||| ||||||||||||||||| ||
Sbjct 55881 --ATTGC-TGATGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAG 55937
Query 188 TAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGA 247
|||| || |||||||| ||| | ||||||| ||||| ||||||||||||| || |
Sbjct 55938 TAGCCAGAGTAAAAGAAAGCAAAAGTGATTCCCGTAGTAGCGGCGAGCGAAATGAGAGCA 55997
Query 248 GCCT 251
||||
Sbjct 55998 GCCT 56001
>seq24894
Length=78027
Score = 104 bits (114), Expect = 4e-20
Identities = 157/219 (72%), Gaps = 11/219 (5%)
Strand=Plus/Plus
Query 34 CGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGATCC 93
||| ||||| |||||| ||| | ||| |||||||| | ||| | | | |||||
Sbjct 56360 CGAGGAAGGGTGTAGTAATCGACGAAATGCTTCGGGGAGTT-GAAAATAAGCATAGATCC 56418
Query 94 GCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTCATTGCATGCTGAATACATAGGTA 153
| ||||| |||||| ||| |||| ||| | ||| |||||||| ||| || |
Sbjct 56419 GGAGATTCCCGAATAGGGCAACC------TTTCAAAC--TGC-TGCTGAATCCATGGGCA 56469
Query 154 TGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCG 212
|||| || ||| ||| ||||||||||||| |||||| || |||||||| ||| |
Sbjct 56470 GGCAAGAGACAACCTGGCAAACTGAAACATCTTAGTAGCCAGAGAAAAAGAAAGCAAAAG 56529
Query 213 AGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251
||||| | ||||| ||||||| |||||||| |||||
Sbjct 56530 CGATTCTCGTAGTAGCGGCGAGCAAAATGGGAGCAGCCT 56568
>seq26676
Length=200246
Score = 98.7 bits (108), Expect = 2e-18
Identities = 168/238 (71%), Gaps = 13/238 (5%)
Strand=Plus/Plus
Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67
||||||||| ||| ||| | || ||| ||||| | ||||| ||| | ||| ||
Sbjct 172544 ATGGTGGATACCTAGGCAC--AAAGACGAGGAAGGGCATAGTAATCGACGAAATGCTTCG 172601
Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127
||||| | ||| | | | ||||| ||||| |||||| ||| |||| ||| |
Sbjct 172602 AGGAGTT-GAAAATAAGCATAGATCCAGAGATTCCCGAATAGGGCAACC------TTTCG 172654
Query 128 GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAA 186
| ||| |||||||| ||| || | |||| || ||| || |||||||||||||| |
Sbjct 172655 AAC--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGTGAACTGAAACATCTTA 172711
Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGA 244
||||| ||||||||||| ||| | |||| || ||||| ||| ||| |||| |||
Sbjct 172712 GTAGCCAGAGGAAAAGAAAGCAAAAGCGATTTCCGTAGTAGCGGCAAGCAAAATAGGA 172769
>seq25266
Length=85337
Score = 89.7 bits (98), Expect = 9e-16
Identities = 151/214 (71%), Gaps = 11/214 (5%)
Strand=Plus/Minus
Query 39 AAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGA 98
|||| ||||||| | | | | ||| ||||||| | ||| | | | |||||| |||
Sbjct 2626 AAGGGCGTAGTAATTGACAAAATGCTTTGGGGAGTT-GAAAATAATCATAGATCCGGAGA 2568
Query 99 TTTCCGAATGGGGAAACCCGGCCCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAA 158
|| ||||| ||| |||| ||| | | ||| |||||||| ||| || | ||||
Sbjct 2567 TTCTCGAATAGGGCAACC------TTTCGAAC--TGC-TGCTGAATCCATTGGCAGGCAA 2517
Query 159 -AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATT 217
|| ||| ||||||||||||||| | ||| || || |||||||| ||| | ||||
Sbjct 2516 GAGACAACCTGGCGAACTGAAACATTTTAGTTGCCAAAGTAAAAGAAAGCAAAAGCGATT 2457
Query 218 CCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251
| | ||||| |||| |||||||||| |||||
Sbjct 2456 CGCGTAGTAGCAGCGAACGAAATGGGAGCAGCCT 2423
>seq23543
Length=59522
Score = 89.7 bits (98), Expect = 9e-16
Identities = 89/114 (78%), Gaps = 1/114 (1%)
Strand=Plus/Plus
Query 139 CTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197
|||||| ||| || | |||| || ||| ||||||| |||||||| |||||| |||
Sbjct 764 CTGAATCCATGGGCAGGCAAGAGACAACATAGCGAACTAAAACATCTCAGTAGCCAGAGG 823
Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251
|||||||| ||| ||||||| ||||| |||||||||||||||| |||||
Sbjct 824 AAAAGAAAGCAAAAATTATTCCCATAGTAGCGGCGAGCGAAATGGGAGCAGCCT 877
>seq23664
Length=60750
Score = 84.2 bits (92), Expect = 4e-14
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 168 GGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227
||||||||||||||||| |||||| ||||||||||| ||| | ||||||| |||||
Sbjct 21478 GGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAACAAAAGCGATTCCCGTAGTAG 21419
Query 228 TGGCGAGCGAAATGGGATGAGCCT 251
| ||||||||||||| |||||
Sbjct 21418 CGATGAGCGAAATGGGAGCAGCCT 21395
>seq24236
Length=73598
Score = 82.4 bits (90), Expect = 1e-13
Identities = 77/97 (79%), Gaps = 1/97 (1%)
Strand=Plus/Plus
Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195
|||||||| ||| || | |||| || |||| |||||||||||| |||| |||||| |
Sbjct 5454 TGCTGAATCCATGGGCAGGCAAGAGAGAACCAGGCGAACTGAAAGATCTTAGTAGCCAGA 5513
Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCG 232
|||||||||| ||| | ||||||| ||||| ||||
Sbjct 5514 GGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCG 5550
>seq25631
Length=97034
Score = 77.0 bits (84), Expect = 6e-12
Identities = 63/77 (82%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228
|||||||||||||||| ||||||| ||||| |||||||||||||| || |||||
Sbjct 34997 GCGAACTGAAACATCTTAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 35056
Query 229 GGCGAGCGAAATGGGAT 245
||||||||| | ||||
Sbjct 35057 GGCGAGCGAGAGCGGAT 35073
>seq11852
Length=9439
Score = 73.4 bits (80), Expect = 7e-11
Identities = 71/90 (79%), Gaps = 1/90 (1%)
Strand=Plus/Minus
Query 139 CTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197
|||||| ||| || | |||| || ||| ||||||||||||||||| |||||| |||
Sbjct 973 CTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGG 914
Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAG 227
|||||||| ||| | ||||||| |||||
Sbjct 913 AAAAGAAAGCAAAAGCGATTCCCGTAGTAG 884
Score = 73.4 bits (80), Expect = 7e-11
Identities = 71/90 (79%), Gaps = 1/90 (1%)
Strand=Plus/Minus
Query 139 CTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197
|||||| ||| || | |||| || ||| ||||||||||||||||| |||||| |||
Sbjct 2867 CTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGG 2808
Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAG 227
|||||||| ||| | ||||||| |||||
Sbjct 2807 AAAAGAAAGCAAAAGCGATTCCCGTAGTAG 2778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918088910368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |