Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq23463 138 2e-30 seq17432 118 2e-24 seq23279 107 4e-21 seq24894 104 4e-20 seq26676 98.7 2e-18 seq25266 89.7 9e-16 seq23543 89.7 9e-16 seq23664 84.2 4e-14 seq24236 82.4 1e-13 seq25631 77.0 6e-12 seq11852 73.4 7e-11 >seq23463 Length=58650 Score = 138 bits (152), Expect = 2e-30 Identities = 179/243 (74%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||| Sbjct 58401 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAATCGACGAAATGCTTCGGG 58460 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| ||| |||| ||| | Sbjct 58461 GAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGGCAACC------TTTCGAA 58513 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 58514 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 58570 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 58571 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 58630 Query 249 CCT 251 ||| Sbjct 58631 CCT 58633 >seq17432 Length=28083 Score = 118 bits (130), Expect = 2e-24 Identities = 174/242 (72%), Gaps = 11/242 (5%) Strand=Plus/Minus Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGG 70 |||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| ||||| Sbjct 869 GTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAATCGACGAAATGCTTCGGGG 810 Query 71 AGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTC 130 ||| | ||| | | | |||||| |||| |||||| ||| |||| ||| | Sbjct 809 AGTT-GAAAATAAGCATAGATCCGGAGATCCCCGAATAGGGCAACC------TTTCAAAC 757 Query 131 ATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTA 189 ||| |||||||| ||| |||| |||| | ||| || |||||||||||||| |||| Sbjct 756 --TGC-TGCTGAATCCATGGGTAGGCAAGATACAACCTGGTGAACTGAAACATCTTAGTA 700 Query 190 GCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGC 249 || ||||||||||| ||| | |||||| ||||| |||||||||||||||| ||| Sbjct 699 GCCAGAGGAAAAGAAAGCAAAAGTGATTCCTGTAGTAGCGGCGAGCGAAATGGGAGCAGC 640 Query 250 CT 251 || Sbjct 639 CT 638 >seq23279 Length=56629 Score = 107 bits (118), Expect = 4e-21 Identities = 173/244 (71%), Gaps = 11/244 (5%) Strand=Plus/Plus Query 9 TGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG 68 |||||||| ||| ||| | || ||| ||||| | ||||| || | ||| || Sbjct 55768 TGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCATAGTAATCGATGAAATGCTTTGG 55827 Query 69 GGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGG 128 ||||| | ||| | | | |||| | || || |||||| ||| |||| ||| | Sbjct 55828 GGAGTTAA-AAATAAGCATAGATCTGGAGCTTCCCGAATAGGGCAACC------TTTCGA 55880 Query 129 TCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAG 187 ||||| || ||||| ||| || | |||| || ||| ||||||||||||||||| || Sbjct 55881 --ATTGC-TGATGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAG 55937 Query 188 TAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGA 247 |||| || |||||||| ||| | ||||||| ||||| ||||||||||||| || | Sbjct 55938 TAGCCAGAGTAAAAGAAAGCAAAAGTGATTCCCGTAGTAGCGGCGAGCGAAATGAGAGCA 55997 Query 248 GCCT 251 |||| Sbjct 55998 GCCT 56001 >seq24894 Length=78027 Score = 104 bits (114), Expect = 4e-20 Identities = 157/219 (72%), Gaps = 11/219 (5%) Strand=Plus/Plus Query 34 CGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGATCC 93 ||| ||||| |||||| ||| | ||| |||||||| | ||| | | | ||||| Sbjct 56360 CGAGGAAGGGTGTAGTAATCGACGAAATGCTTCGGGGAGTT-GAAAATAAGCATAGATCC 56418 Query 94 GCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTCATTGCATGCTGAATACATAGGTA 153 | ||||| |||||| ||| |||| ||| | ||| |||||||| ||| || | Sbjct 56419 GGAGATTCCCGAATAGGGCAACC------TTTCAAAC--TGC-TGCTGAATCCATGGGCA 56469 Query 154 TGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCG 212 |||| || ||| ||| ||||||||||||| |||||| || |||||||| ||| | Sbjct 56470 GGCAAGAGACAACCTGGCAAACTGAAACATCTTAGTAGCCAGAGAAAAAGAAAGCAAAAG 56529 Query 213 AGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 ||||| | ||||| ||||||| |||||||| ||||| Sbjct 56530 CGATTCTCGTAGTAGCGGCGAGCAAAATGGGAGCAGCCT 56568 >seq26676 Length=200246 Score = 98.7 bits (108), Expect = 2e-18 Identities = 168/238 (71%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || ||| ||||| | ||||| ||| | ||| || Sbjct 172544 ATGGTGGATACCTAGGCAC--AAAGACGAGGAAGGGCATAGTAATCGACGAAATGCTTCG 172601 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 ||||| | ||| | | | ||||| ||||| |||||| ||| |||| ||| | Sbjct 172602 AGGAGTT-GAAAATAAGCATAGATCCAGAGATTCCCGAATAGGGCAACC------TTTCG 172654 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAA 186 | ||| |||||||| ||| || | |||| || ||| || |||||||||||||| | Sbjct 172655 AAC--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGTGAACTGAAACATCTTA 172711 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGA 244 ||||| ||||||||||| ||| | |||| || ||||| ||| ||| |||| ||| Sbjct 172712 GTAGCCAGAGGAAAAGAAAGCAAAAGCGATTTCCGTAGTAGCGGCAAGCAAAATAGGA 172769 >seq25266 Length=85337 Score = 89.7 bits (98), Expect = 9e-16 Identities = 151/214 (71%), Gaps = 11/214 (5%) Strand=Plus/Minus Query 39 AAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGA 98 |||| ||||||| | | | | ||| ||||||| | ||| | | | |||||| ||| Sbjct 2626 AAGGGCGTAGTAATTGACAAAATGCTTTGGGGAGTT-GAAAATAATCATAGATCCGGAGA 2568 Query 99 TTTCCGAATGGGGAAACCCGGCCCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAA 158 || ||||| ||| |||| ||| | | ||| |||||||| ||| || | |||| Sbjct 2567 TTCTCGAATAGGGCAACC------TTTCGAAC--TGC-TGCTGAATCCATTGGCAGGCAA 2517 Query 159 -AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATT 217 || ||| ||||||||||||||| | ||| || || |||||||| ||| | |||| Sbjct 2516 GAGACAACCTGGCGAACTGAAACATTTTAGTTGCCAAAGTAAAAGAAAGCAAAAGCGATT 2457 Query 218 CCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 | | ||||| |||| |||||||||| ||||| Sbjct 2456 CGCGTAGTAGCAGCGAACGAAATGGGAGCAGCCT 2423 >seq23543 Length=59522 Score = 89.7 bits (98), Expect = 9e-16 Identities = 89/114 (78%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 139 CTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197 |||||| ||| || | |||| || ||| ||||||| |||||||| |||||| ||| Sbjct 764 CTGAATCCATGGGCAGGCAAGAGACAACATAGCGAACTAAAACATCTCAGTAGCCAGAGG 823 Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 |||||||| ||| ||||||| ||||| |||||||||||||||| ||||| Sbjct 824 AAAAGAAAGCAAAAATTATTCCCATAGTAGCGGCGAGCGAAATGGGAGCAGCCT 877 >seq23664 Length=60750 Score = 84.2 bits (92), Expect = 4e-14 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 168 GGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227 ||||||||||||||||| |||||| ||||||||||| ||| | ||||||| ||||| Sbjct 21478 GGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAACAAAAGCGATTCCCGTAGTAG 21419 Query 228 TGGCGAGCGAAATGGGATGAGCCT 251 | ||||||||||||| ||||| Sbjct 21418 CGATGAGCGAAATGGGAGCAGCCT 21395 >seq24236 Length=73598 Score = 82.4 bits (90), Expect = 1e-13 Identities = 77/97 (79%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195 |||||||| ||| || | |||| || |||| |||||||||||| |||| |||||| | Sbjct 5454 TGCTGAATCCATGGGCAGGCAAGAGAGAACCAGGCGAACTGAAAGATCTTAGTAGCCAGA 5513 Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCG 232 |||||||||| ||| | ||||||| ||||| |||| Sbjct 5514 GGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCG 5550 >seq25631 Length=97034 Score = 77.0 bits (84), Expect = 6e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 |||||||||||||||| ||||||| ||||| |||||||||||||| || ||||| Sbjct 34997 GCGAACTGAAACATCTTAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 35056 Query 229 GGCGAGCGAAATGGGAT 245 ||||||||| | |||| Sbjct 35057 GGCGAGCGAGAGCGGAT 35073 >seq11852 Length=9439 Score = 73.4 bits (80), Expect = 7e-11 Identities = 71/90 (79%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 139 CTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197 |||||| ||| || | |||| || ||| ||||||||||||||||| |||||| ||| Sbjct 973 CTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGG 914 Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAG 227 |||||||| ||| | ||||||| ||||| Sbjct 913 AAAAGAAAGCAAAAGCGATTCCCGTAGTAG 884 Score = 73.4 bits (80), Expect = 7e-11 Identities = 71/90 (79%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 139 CTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197 |||||| ||| || | |||| || ||| ||||||||||||||||| |||||| ||| Sbjct 2867 CTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGG 2808 Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAG 227 |||||||| ||| | ||||||| ||||| Sbjct 2807 AAAAGAAAGCAAAAGCGATTCCCGTAGTAG 2778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918088910368