Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq12446 111 3e-22 seq13781 102 1e-19 seq23997 98.7 2e-18 seq7594 96.9 6e-18 seq7514 91.5 2e-16 seq15840 89.7 8e-16 seq23249 86.0 1e-14 seq15977 78.8 2e-12 seq3635 75.2 2e-11 seq6005 73.4 6e-11 >seq12446 Length=10480 Score = 111 bits (122), Expect = 3e-22 Identities = 100/123 (81%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | ||||||| | ||| || ||| || |||| Sbjct 10259 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 10316 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | |||||||||||| |||||||||||||||||||||||| || | Sbjct 10317 GGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 10376 Query 121 GAA 123 ||| Sbjct 10377 GAA 10379 >seq13781 Length=21453 Score = 102 bits (112), Expect = 1e-19 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | ||||| | | ||| || ||| || |||| Sbjct 19474 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGATCATCGCGCTTGGTTGAAAAGCCAGT 19417 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | ||||||||| | |||||||||||| ||||||||||||||||||||||||| || | Sbjct 19416 GGCATGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAGGCTA 19357 Query 121 GAA 123 ||| Sbjct 19356 GAA 19354 Score = 73.4 bits (80), Expect = 6e-11 Identities = 49/55 (89%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 69 GCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 |||||| | |||||||||||| |||||||||||||||||||||||| || |||| Sbjct 5425 GCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAA 5371 >seq23997 Length=74762 Score = 98.7 bits (108), Expect = 2e-18 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| | || || ||| || | || Sbjct 2899 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATCGCACTTGGTTGAAAAGCCTGT 2842 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| |||||||| | || ||||||||| |||||||||||||||||||||||| || | Sbjct 2841 GGCGCAAAGCTACCGTGTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 2782 Query 121 GAA 123 ||| Sbjct 2781 GAA 2779 >seq7594 Length=4981 Score = 96.9 bits (106), Expect = 6e-18 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90 ||||| | ||| || ||| || ||||| |||||||||||| | |||||||||||| Sbjct 3839 TTGGTCATCGCGCTTGGTTGAAAAGCCAGTGTCGCGAAGCTACCGTGTGCTGGATTATGA 3898 Query 91 CTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 ||||||||||||||||||||||||| || |||| Sbjct 3899 CTGAACGCCTCTAAGTCAGAATCCAGGCTAGAA 3931 >seq7514 Length=7162 Score = 91.5 bits (100), Expect = 2e-16 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90 ||||| | ||| || ||| || ||||| |||||||||||| | |||||||||||| Sbjct 6083 TTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCTGGATTATGA 6024 Query 91 CTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 |||||||||||||||||||||||| || |||| Sbjct 6023 CTGAACGCCTCTAAGTCAGAATCCGGGCTAGAA 5991 >seq15840 Length=22139 Score = 89.7 bits (98), Expect = 8e-16 Identities = 89/113 (79%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||| ||||| || |||| | |||||||||||||| || ||| || || | Sbjct 12844 GTACGAGATGAACCATTGA-TTCACAC-AATTGGTTTTTGCGCTTGGTTGAAAAGCCATT 12787 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 |||||||||| | | ||||||||||| ||||| ||||||||||||||||| Sbjct 12786 AGCGCGAAGCTAGCGTGTGCTGGATTATAACTGAATGCCTCTAAGTCAGAATC 12734 >seq23249 Length=76910 Score = 86.0 bits (94), Expect = 1e-14 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||||| |||||||||||| | |||||||||||| ||||||||||||||||||||||| Sbjct 74796 AGCCAGTGGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATC 74855 >seq15977 Length=29732 Score = 78.8 bits (86), Expect = 2e-12 Identities = 55/63 (87%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 51 ACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGA 110 || || ||||| |||||||||||| | |||||||| ||| |||||||||||||||| ||| Sbjct 6220 ACAAGCCAGTGGCGCGAAGCTACCGTGTGCTGGATCATGACTGAACGCCTCTAAGTTAGA 6279 Query 111 ATC 113 ||| Sbjct 6280 ATC 6282 >seq3635 Length=2525 Score = 75.2 bits (82), Expect = 2e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 58 AGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 |||| |||||||||||| | |||||||| ||| |||||||||||||||||| |||| Sbjct 1 AGTGGCGCGAAGCTACCGTGTGCTGGATCATGACTGAACGCCTCTAAGTCAAAATC 56 >seq6005 Length=6410 Score = 73.4 bits (80), Expect = 6e-11 Identities = 49/55 (89%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 69 GCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 |||||| | |||||||||||| |||||||||||||||||||||||| || |||| Sbjct 3933 GCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAA 3987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818931183872