Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq24612 181 8e-41 >seq24612 Length=73035 Score = 181 bits (200), Expect = 8e-41 Identities = 574/874 (66%), Gaps = 18/874 (2%) Strand=Plus/Minus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| || |||| | |||||| |||||||| || || || || |||| Sbjct 59980 TGTTCCCAATTCAGTACCCACAAATTTGGGAAATGTACAAGAAAGCTATGGCATCTTTCT 59921 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCG 61183 |||||| || || |||||| | || || | | | ||||| || | || Sbjct 59920 GGACGGCAGAAGAAGTCGATCTATCTGCCGATACTCGTCATTGGGAAAACCTAACATCCG 59861 Query 61184 GTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCA 61243 ||||| |||||||| | |||||| | ||||| ||||| || || ||||| ||||| Sbjct 59860 GTGAAAGGCATTTCATCACTCATGTGCTTGCGTTTTTTGCTGCCTCAGACGGCATCGTTT 59801 Query 61244 ATGAGAATTTAT-TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 ||||| | ||||| ||| | | | || || ||||| | ||||||||| |||| Sbjct 59800 TAGAGAACCTCGCTGGAAGGTT-CATGAAAGATGTCCAAGTTGCTGAGGCGCGTGCTTTC 59742 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 || || ||||| || ||||| |||||| |||| || |||||||||||| | || | || Sbjct 59741 TATGGATTCCAAATCGCCATTGAGAATATCCATTCCGAGATGTACAGTTTGCTGTTGGAG 59682 Query 61363 ACGTACATCAGGGA-GCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACC 61421 ||||||||| ||| | | || || | | | | |||||| || |||||||| || || Sbjct 59681 TCGTACATCAAGGACTCTGACGAAAAGAGTA-GGTTGTTCCGGGCAATCGAGACTATCCC 59623 Query 61422 -GGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACAT 61480 | | |||| ||| ||| | |||||| | |||||| | | | | || | Sbjct 59622 TTGTGTTGAA-AAGAAGGCGAAGTGGGCCCTTCGTTGGAT---CGATGGCTCTGAAACCT 59567 Query 61481 TTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTG 61540 | | || || ||| |||| ||||| || || || | || || ||| |||| Sbjct 59566 TCGCAGAGCGTTTGGTGGCTTTTGCTTGTGTAGAAGGGATTTTCTTTTCCGGA-AGTTT- 59509 Query 61541 CCG--CAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGA 61598 | | |||| ||||||||||| || || || | |||||||| | || ||| ||||| Sbjct 59508 CTGTTCAATATTTTGGTTGAAAAAGCGGGGGTTAATGCCCGGATTAACTTTCTCGAATGA 59449 Query 61599 GTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTA 61658 |||||| ||| | ||||| || |||| ||||||||||| ||||| | || | | Sbjct 59448 GTTGATTTCAAGAGACGAAGGTTTGCACTGTGATTTTGCGTGCTTGCTTTACA---GTTT 59392 Query 61659 TCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTAT 61718 ||| || | | | | ||| || || | | || ||| ||||| || || Sbjct 59391 GCTGAGGACGAAGCTGACTGGGGAACGAGTCAGGGGAATCGTTGCAGAGGCTGTGGAGAT 59332 Query 61719 CGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACT 61778 ||| ||| ||| || ||| ||| ||||| | || | || |||||| | | | Sbjct 59331 AGAAAGGGAGTTTGTGTGTGATGCTCTGCCCTGTGCGCTGGTGGGTATGAATGGAGATTT 59272 Query 61779 AATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGG-TATGAAGC 61837 ||| || || |||||||| || ||| | |||||| | |||||| |||| | Sbjct 59271 GATGAGTACATACATAGAATTTGTGGCTGACAGATTGTTGGATGCTTTGGGTTATG-ACA 59213 Query 61838 GGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGA 61897 ||| || ||| | | || |||||||||| ||||| ||||| | | || |||| Sbjct 59212 AGATGTACAATGCTCAGAATCCATTTGATTGGATGGAGCTGATTAGCTTACAAGGGAAGA 59153 Query 61898 CGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 | ||||| || ||||| | || || || ||||| Sbjct 59152 CTAATTTCTTTGAGAAGAGAGTTGGGGAGTATCA 59119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397403873120720