Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20pennellii_20[refseq_20GCF_5F001406875.1_202014-07-11]
12 sequences; 926,426,464 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq7 75.2 5e-12
seq2 75.2 5e-12
seq6 71.6 6e-11
>seq7
Length=79292169
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 17554928 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 17554986
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 17561722 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 17561780
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 17579407 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 17579465
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||| ||||| || |||||||||| |||||||||||| ||| ||||| ||||||||
Sbjct 54178360 GGAAAATAAACTTACAAGGATTCCCTTAGTAACGGCGAGCAAACCGGGAATAGCCCAGC 54178302
>seq2
Length=59803892
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 24929261 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 24929203
>seq6
Length=60730942
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| | |||||||||| |||| ||||| ||||||||
Sbjct 25715632 GGAAAAGAAACTTACAAGGATTCCCCTAATAACGGCGAGAGAACCGGGAACAGCCCAGC 25715574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230399974080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |