Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20pennellii_20[refseq_20GCF_5F001406875.1_202014-07-11]
12 sequences; 926,426,464 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq12 77.0 4e-12
seq6 77.0 4e-12
seq7 75.2 1e-11
>seq12
Length=83305730
Score = 77.0 bits (84), Expect = 4e-12
Identities = 78/99 (79%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 65053927 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 65053869
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110
|| |||||||| ||||||||||| |||| |||| |||
Sbjct 65053868 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGT 65053830
>seq6
Length=60730942
Score = 77.0 bits (84), Expect = 4e-12
Identities = 64/77 (83%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTAA 92
|||||| || |||| |||||||||||||| | | ||||| || |||||||| ||||||||
Sbjct 10199338 TCCTATACTGTTATCCCATGCTAATGTATACAGAGCGTAGGCATGCTTTGAGCACTCTAA 10199279
Query 93 TTTTCTCAAGGTAAAAG 109
||| |||| |||| ||
Sbjct 10199278 TTTCTTCAAAGTAACAG 10199262
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 25717505 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 25717563
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 25717564 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 25717601
>seq7
Length=79292169
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 17553302 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 17553244
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 17553243 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 17553206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595199930808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |