Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pennellii_20[refseq_20GCF_5F001406875.1_202014-07-11] 12 sequences; 926,426,464 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq12 77.0 4e-12 seq6 77.0 4e-12 seq7 75.2 1e-11 >seq12 Length=83305730 Score = 77.0 bits (84), Expect = 4e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 65053927 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 65053869 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || |||||||| ||||||||||| |||| |||| ||| Sbjct 65053868 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGT 65053830 >seq6 Length=60730942 Score = 77.0 bits (84), Expect = 4e-12 Identities = 64/77 (83%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTAA 92 |||||| || |||| |||||||||||||| | | ||||| || |||||||| |||||||| Sbjct 10199338 TCCTATACTGTTATCCCATGCTAATGTATACAGAGCGTAGGCATGCTTTGAGCACTCTAA 10199279 Query 93 TTTTCTCAAGGTAAAAG 109 ||| |||| |||| || Sbjct 10199278 TTTCTTCAAAGTAACAG 10199262 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 25717505 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 25717563 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 25717564 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 25717601 >seq7 Length=79292169 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 17553302 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 17553244 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 17553243 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 17553206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199930808