Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pimpinellifolium_20[genbank_20GCA_5F000230315.1_202011-10- 06] 309,180 sequences; 688,247,059 total letters Query= AAMG01001198.1 Length=123 Score E Sequences producing significant alignments: (Bits) Value seq36516 105 4e-21 >seq36516 Length=1141 Score = 105 bits (116), Expect = 4e-21 Identities = 93/115 (81%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 3 GAGGTTTCTTCTCCTAGTTTGGACAAGACCCCACAATCTACAGCGGAAAATGGAGTTTCC 62 ||||||| ||| |||| |||||| |||| |||||| ||| | || ||||||| ||||| Sbjct 1028 GAGGTTTTTTCACCTAATTTGGAGAAGAACCCACAGTCTGCTGCTGAAAATGTTGTTTCT 1087 Query 63 TTATATGGATTTGGGTGCTTCTGTACAAAGTTTGCCGGTGGTAACAGATCCGGTA 117 ||||||| |||| ||| ||||| ||||||||||||| || | |||||||||| Sbjct 1088 TTATATG-ATTTAAGTGGTTCTGCTCAAAGTTTGCCGGCGGCAGTAGATCCGGTA 1141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296737387800