Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pimpinellifolium_20[genbank_20GCA_5F000230315.1_202011-10- 06] 309,180 sequences; 688,247,059 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq31581 250 4e-64 seq165174 107 3e-21 seq154587 100 5e-19 seq195721 91.5 2e-16 seq219188 89.7 8e-16 seq165749 89.7 8e-16 seq94308 89.7 8e-16 seq90975 86.0 1e-14 seq270172 84.2 4e-14 seq142991 84.2 4e-14 seq130936 84.2 4e-14 seq246851 80.6 4e-13 seq221454 80.6 4e-13 seq257760 75.2 2e-11 seq140182 75.2 2e-11 seq74851 75.2 2e-11 seq186390 73.4 6e-11 >seq31581 Length=479 Score = 250 bits (276), Expect = 4e-64 Identities = 230/283 (81%), Gaps = 15/283 (5%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||||||||||||| |||| |||| |||||| Sbjct 75 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 132 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 133 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 192 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | |||| || || |||| | |||| || ||| ||||||||| ||||| || | Sbjct 193 GAACGCGATGATACT-ACCCGCACGTTGTAGACGTATAAGAATAGGCTCCGGCCTCGTAT 251 Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||||||||| | | | ||| || |||| | |||| | | | ||| || Sbjct 252 CTTAGCAGGCGATTCCTCCTCCGGCCTC-----GAAGTGGTCGGCGGT-AATTCGCGTAT 305 Query 237 TGCAATTTCACCATGCGCAGGGAT-AAATCCTTTGCAGACGAC 278 || |||||| || |||| ||||| |||||||||||||||||| Sbjct 306 TGTAATTTCGGCACGCGC-GGGATCAAATCCTTTGCAGACGAC 347 >seq165174 Length=307 Score = 107 bits (118), Expect = 3e-21 Identities = 99/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||| ||||| || ||| || |||| Sbjct 273 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGCCATTGCGCTTGGTTGAAAAGCCAGT 216 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | |||||||||||| | |||||||||||||||||||||| || | Sbjct 215 GGCGCGAAGCTACCGTGTGCTGGATTATGATTAAACGCCTCTAAGTCAGAATCCAGGCTA 156 Query 121 GAA 123 ||| Sbjct 155 GAA 153 >seq154587 Length=647 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| || |||||| | | ||| || ||| || ||| Sbjct 444 GTACGAGAGGAACCGTTGA-TTCA-AACAATTGGCTATCGCGCTTGGTTGAAAAGATAGT 501 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||| | |||||||||||| ||||| |||||||||||||||||| Sbjct 502 AGCGCGAAGCTACCCTGTGCTGGATTATGACTGAATGCCTCTAAGTCAGAATCC 555 >seq195721 Length=483 Score = 91.5 bits (100), Expect = 2e-16 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||| | ||| || ||| || |||| Sbjct 54 GTACGAGAGGAACCGTTGA-TTCACTC-AATTGGCCATCGCGCTTGGTTGAAAAGCCAGT 111 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||| ||| |||||||| ||||| ||||||||||||||||| Sbjct 112 GGCGCGAAGCTACCATGTGCAGGATTATGATTGAACCCCTCTAAGTCAGAATCC 165 >seq219188 Length=464 Score = 89.7 bits (98), Expect = 8e-16 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||| || || |||| | |||||| | || || ||| || |||| Sbjct 314 GTACGAGAGGAAACGTTGA-TTCACAC-AATTGGCCATCGCACTTGGTTGAAAAGCCAGT 257 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||||||| | |||||||||||| ||||||||||||||||||||||| || | Sbjct 256 GGTGCGAAGCTACCGTGTGCTGGATTATGATTGAACGCCTCTAAGTCAGAATCCGGGCTA 197 Query 121 GAA 123 ||| Sbjct 196 GAA 194 >seq165749 Length=310 Score = 89.7 bits (98), Expect = 8e-16 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||| |||| || || |||| | |||||| | || || ||| || |||| Sbjct 273 GTACGAGGGGAATCGTTGA-TTCACAC-AATTGGCAATCACGCTTGGTTGAAAAGCCAGT 216 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | |||||||||||| ||||||||||||||||||||||| || | Sbjct 215 GGCGCGAAGCTACCGTGTGCTGGATTATGATTGAACGCCTCTAAGTCAGAATCCGGGCTA 156 Query 121 GAA 123 ||| Sbjct 155 GAA 153 >seq94308 Length=956 Score = 89.7 bits (98), Expect = 8e-16 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||| |||||||| || |||| | || ||| | ||| || ||| || |||| Sbjct 406 GTACGATAGGAACCGTTGA-TTCACACTA-TTGTCCATCGCGCTTGGTTGAAAAGCCAGT 349 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | |||||||||||| || |||||||||| |||||||||| || | Sbjct 348 GGCGCGAAGCTACCGTGTGCTGGATTATGACTATACGCCTCTAAATCAGAATCCAGGCTA 289 Query 121 GAA 123 ||| Sbjct 288 GAA 286 >seq90975 Length=1426 Score = 86.0 bits (94), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | ||| || | ||| || ||| || |||| Sbjct 212 GTACGAGAGGAACCGTTGA-TTCACAC-AATAGGCCATCGCGCTTGGTTGAAAAGCCAGT 155 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | ||||||||||| | |||||||||||| | |||||||||||||||| ||||| Sbjct 154 GGCGCGAAGCTACTGTGTGCTGGATTATGACGGAACGCCTCTAAGTCAAAATCC 101 >seq270172 Length=395 Score = 84.2 bits (92), Expect = 4e-14 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| || |||| | |||||| | ||| || ||| | |||| Sbjct 253 GTACGAGAGGAACCATTGA-TTCACAC-AATTGGCCATCGCGCTTGGTTGAAAACCCAGT 196 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||||||| | ||| |||||||| |||||| ||||||||||||||||| || | Sbjct 195 GGTGCGAAGCTACCGTGTGCGGGATTATGACTGAACTCCTCTAAGTCAGAATCCGAGCTA 136 Query 121 GAA 123 ||| Sbjct 135 GAA 133 >seq142991 Length=363 Score = 84.2 bits (92), Expect = 4e-14 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| || |||| | |||||| | ||| || ||| || |||| Sbjct 13 GTACGAGAGGAACCATTGA-TTCACAC-AATTGGCCATCGCGCTTGGTTGAAAAGCCAGT 70 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||| ||| | ||| ||||||| |||||||||||||||||||||||| || | Sbjct 71 GGTGCGAAGCCACCGTGTGCGGGATTATTACTGAACGCCTCTAAGTCAGAATCCGGGCTA 130 Query 121 GAA 123 ||| Sbjct 131 GAA 133 >seq130936 Length=562 Score = 84.2 bits (92), Expect = 4e-14 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 58 AGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 117 |||| |||||||||||||| |||||||||||| ||||| |||||||||||||||| | | Sbjct 162 AGTGGCGCGAAGCTACCATGTGCTGGATTATGACTGAATGCCTCTAAGTCAGAATGCGGG 103 Query 118 CCAGAA 123 | |||| Sbjct 102 CTAGAA 97 >seq246851 Length=416 Score = 80.6 bits (88), Expect = 4e-13 Identities = 93/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||||| || |||| | |||||| | ||| || ||| | |||| Sbjct 144 GTATGAGAGGAACCGTTGA-TTCACAC-AATTGGCCATCGCGCTTGGTTGAAAATCCAGT 87 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| | || |||||||| |||||| |||||||||||||||||| || | Sbjct 86 GGTACGAAGCTACCGTGTGAGGGATTATGACTGAACACCTCTAAGTCAGAATCCAGGCTA 27 Query 121 GAA 123 ||| Sbjct 26 GAA 24 >seq221454 Length=511 Score = 80.6 bits (88), Expect = 4e-13 Identities = 93/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||| | ||| || ||| | ||| Sbjct 223 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGCCATCGCGCTTGGTTGAAATGCAAGT 280 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||||| | | ||| |||||||| |||||||||| ||||||||||||| || | Sbjct 281 GGTGCGAAGCTATCGTGTGCGGGATTATGACTGAACGCCTATAAGTCAGAATCCGGGCTA 340 Query 121 GAA 123 ||| Sbjct 341 GAA 343 >seq257760 Length=300 Score = 75.2 bits (82), Expect = 2e-11 Identities = 92/123 (75%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||| || || |||| | |||||| | ||| || | | || || | Sbjct 26 GTACGAGAGGAATCGTTGA-TTCACAC-AATTGGCCATCGCGCTTGGTTAAAAAGCCAAT 83 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||||||| | | | |||||||| ||||| |||||||||||||||||| || | Sbjct 84 GGTGCGAAGCTACCGTGTTCGGGATTATGACTGAATGCCTCTAAGTCAGAATCCGGGCTA 143 Query 121 GAA 123 ||| Sbjct 144 GAA 146 >seq140182 Length=2130 Score = 75.2 bits (82), Expect = 2e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||||| ||||||||||| | |||||||||||| |||||||||| ||| |||||||| Sbjct 55 AGCCAGTGGAGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTTTAAATCAGAATC 114 Query 114 C 114 | Sbjct 115 C 115 >seq74851 Length=529 Score = 75.2 bits (82), Expect = 2e-11 Identities = 92/123 (75%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||| | ||| | ||| | || Sbjct 208 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGCCATCGCGCTTCGTTGAAAATCCAAA 265 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||||||| | |||||||||||| ||||||||||| |||| ||||||| || | Sbjct 266 GGCGCGAAGCTACAGTGTGCTGGATTATGACTGAACGCCTCAAAGTAAGAATCCGGGCTA 325 Query 121 GAA 123 ||| Sbjct 326 GAA 328 >seq186390 Length=16548 Score = 73.4 bits (80), Expect = 6e-11 Identities = 85/112 (76%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||| | |||| || || |||||| | || | || ||| || || | Sbjct 6315 GTACGAGAGGAATTGTTGAAT-CACAA-AATTGGCTATTTCTCATGGTTGAAAAGACAAT 6258 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 | |||||||||||||| ||||||||||| |||| |||||||||| | ||| Sbjct 6257 GGCGCGAAGCTACCATGTGCTGGATTATAAGTGAATGCCTCTAAGTAATAAT 6206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 816746347520