Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq14854 141 1e-31 seq62 141 1e-31 seq135 138 2e-30 seq298 113 6e-23 seq136 107 3e-21 seq118 93.3 6e-17 seq82 91.5 2e-16 seq547 86.0 9e-15 seq134 86.0 9e-15 seq910 84.2 3e-14 seq190 82.4 1e-13 seq5 82.4 1e-13 seq608 80.6 4e-13 seq8 75.2 2e-11 >seq14854 Length=155296 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 107351 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 107293 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 107292 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 107246 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 107245 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 107192 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 107191 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 107132 Query 246 GTA 248 ||| Sbjct 107131 GTA 107129 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 133683 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 133741 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 133742 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 133788 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 133789 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 133842 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 133843 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 133902 Query 246 GTA 248 ||| Sbjct 133903 GTA 133905 >seq62 Length=2166112 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 902061 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 902119 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 902120 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 902166 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 902167 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 902220 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 902221 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 902280 Query 246 GTA 248 ||| Sbjct 902281 GTA 902283 Score = 114 bits (126), Expect = 2e-23 Identities = 90/108 (83%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||||||||||||||||| |||||||||| ||||||| | |||| | Sbjct 902663 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 902722 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || | ||| ||||||||||||| |||||||||||||||| |||| Sbjct 902723 CGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTA 902770 >seq135 Length=1498384 Score = 138 bits (152), Expect = 2e-30 Identities = 178/243 (73%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||| | ||||| ||| ||| | || Sbjct 272523 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATTGTGTTACCA-CTTAGCAGAGTCC 272581 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | | | |||| | Sbjct 272582 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 272639 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | |||||||||||| ||||||| |||| ||||||||||| ||||| Sbjct 272640 T--------AGGAGAG-CACCCCTTCTCCTGAAGTTATGGGGTCATTTTGCCGAGTTCCT 272690 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| |||||| || ||||||||||||||| | Sbjct 272691 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 272750 Query 246 GTA 248 ||| Sbjct 272751 GTA 272753 >seq298 Length=802456 Score = 113 bits (124), Expect = 6e-23 Identities = 173/245 (71%), Gaps = 24/245 (10%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| || ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 17896 CCTTCCGGCAGTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 17838 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||| | | || || |||||||| | Sbjct 17837 TGTGTTTTTGGTAAACAGTCACCTGAGCCTGGTCACTGCGACC---------------CT 17793 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| || || Sbjct 17792 T--TTTGTGAGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTTCT 17737 Query 186 TAACCACAGTT--CACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTA 243 || | |||| | |||| | ||| ||||||||||||| |||| |||||| ||| Sbjct 17736 TAGAGAGAGTTGTCTCCCG--CCCCTAGGTATTCTCTACCTACCCACATGTGTCAATTTC 17679 Query 244 CGGTA 248 |||| Sbjct 17678 GGGTA 17674 >seq136 Length=1492581 Score = 107 bits (118), Expect = 3e-21 Identities = 165/237 (70%), Gaps = 20/237 (8%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||| ||||||||| || |||||| | ||||| ||| || |||| Sbjct 500884 CCTTCCGGCACTGGGAAGGCGTCAGCCCCCATACATGGTCTTACAA-CTTTGCGGAGACC 500826 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || ||||||| | Sbjct 500825 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCATTGCGACC-------------CTTT 500779 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || | | |||||||||||||||||||||||||||| |||||||||| || | Sbjct 500778 TTGT------GATGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTTCA 500725 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 || | |||| | || | ||| ||||||||||||| |||||| ||||||||| Sbjct 500724 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTATGTCGGTTT 500668 >seq118 Length=1616611 Score = 93.3 bits (102), Expect = 6e-17 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 |||||||||||| ||||||||||||| |||||||||| |||||| || |||| | | Sbjct 156210 GCACCCCTTCTCTCGAAGTTACGGGGTAATTTTGCCGAGTTCCTTCGACATGGTTCTCTC 156151 Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237 | |||| |||||| |||||| || |||||||||| Sbjct 156150 AAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTC 156115 >seq82 Length=1932198 Score = 91.5 bits (100), Expect = 2e-16 Identities = 171/244 (70%), Gaps = 23/244 (9%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||||||| |||||||||| ||||| ||||| | |||| | ||| |||| Sbjct 106020 CCTTCCATCACTGGGCAGGCGTTAGTCCCCATACACAGTTTTAC-GACTTTATGGAGACC 105962 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||| || ||||||||| || | | || |||||| | | | | | Sbjct 105961 TGTGTTGTTGGTAAACAGTAGCC-----CAAGCCT----GACCACTGCAATCCC----CT 105915 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || |||||||||||| |||||||||||||| ||||| |||| ||||| Sbjct 105914 TTGTG----AGGAG--GCACCCCTTCTCTCGAAGTTACGGGGCTATTTTTCCGAGTTCCT 105861 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGA-CCACCTGTGTCGGTTTAC 244 || || |||| | | || ||| ||||| | || |||| |||| ||||| |||||| Sbjct 105860 TAGACAGAGTTGTCTCACACCCCTAGGTATT-TATA-CTGACCCACATGTGTTGGTTTAG 105803 Query 245 GGTA 248 |||| Sbjct 105802 GGTA 105799 >seq547 Length=312868 Score = 86.0 bits (94), Expect = 9e-15 Identities = 82/108 (76%), Gaps = 14/108 (13%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 220249 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA------------- 220295 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || | | ||||||||||||| |||||||||||||||| |||| Sbjct 220296 -GAGAGAGTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTA 220342 >seq134 Length=1515740 Score = 86.0 bits (94), Expect = 9e-15 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 |||||||||||| | ||||||| |||| || |||| || ||||||| | |||| | | Sbjct 167339 GCACCCCTTCTCTCAAAGTTACTGGGCTATATTGCTGAGTTCCTTAGAGAGAGTTGTCGC 167280 Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | | ||| ||||||||||||| ||||||||||||||| |||| Sbjct 167279 GTGCCCCTAGGTATTCTCTACCTACTCACCTGTGTCGGTTTCAGGTA 167233 Score = 80.6 bits (88), Expect = 4e-13 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 |||||||||||| | ||||||| |||| || |||| || ||||||| | || | | | Sbjct 136980 GCACCCCTTCTCTCAAAGTTACTGGGCTATATTGCTGAGTTCCTTAGAGAAAGCTGTCGC 136921 Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | | ||| ||||||||||||| ||||||||||||||| |||| Sbjct 136920 GTGCCCCTAGGTATTCTCTACCTACTCACCTGTGTCGGTTTTAGGTA 136874 >seq910 Length=54785 Score = 84.2 bits (92), Expect = 3e-14 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 |||||||||||||||||||||||||| |||||||| || |||||| || |||| | | Sbjct 3960 GCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCTGAGTTCCTTCGACATGGTTCTCTC 4019 Query 202 GAACGCCTTAGTATTCTCTACCTG 225 | |||| |||||| |||||| || Sbjct 4020 AAGCGCCCTAGTATACTCTACTTG 4043 >seq190 Length=1182647 Score = 82.4 bits (90), Expect = 1e-13 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 ||||||||||||||||||||||| |||| ||||| | | || |||| | |||| | Sbjct 185826 GGCACCCCTTCTCCCGAAGTTACAGGGCTATTTTTCTAAGTTTCTTAGAGAGAGTTGTCT 185885 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | || ||| ||||||||||||| | |||||||| ||||| |||| Sbjct 185886 TGCACCCCTAGGTATTCTCTACCTACCAACCTGTGTTGGTTTTGGGTA 185933 >seq5 Length=4371776 Score = 82.4 bits (90), Expect = 1e-13 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 ||||||||||||||||| ||||||||| || ||| || ||||||| | |||| || Sbjct 3485123 GGCACCCCTTCTCCCGACATTACGGGGCTATCTTGTTGAGTTCCTTAGAGAGAGTTGTCC 3485064 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | || ||| ||||| |||||| | ||| |||||| ||||| |||| Sbjct 3485063 CACACTCCTAGGTATTATCTACCAGCCCAACTGTGTTGGTTTCAGGTA 3485016 >seq608 Length=253366 Score = 80.6 bits (88), Expect = 4e-13 Identities = 73/91 (80%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| | ||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 171716 CCTTCCAGCCCCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 171774 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTA 96 |||||||||| |||||||||||| | | ||| Sbjct 171775 TGTGTTTTTAATAAACAGTCGCTACTCGCTA 171805 >seq8 Length=4063183 Score = 75.2 bits (82), Expect = 2e-11 Identities = 76/99 (77%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 144 ACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGA 203 |||| ||||| ||||||||||| ||||||| ||| |||||| || |||| | | | Sbjct 1617782 ACCCTTTCTCATCAAGTTACGGGGTCATTTTGTCGAGTTCCTTCGACATGGTTCTCTCAA 1617723 Query 204 ACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 |||| |||||| || ||| || ||||| ||||||||| Sbjct 1617722 GCGCCCTAGTATACTATACTTGTTCACCTCTGTCGGTTT 1617684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694300077142