Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19]
14,854 sequences; 705,934,411 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq6013 89.7 2e-16
seq693 84.2 1e-14
seq868 80.6 1e-13
seq443 80.6 1e-13
seq80 80.6 1e-13
>seq6013
Length=532
Score = 89.7 bits (98), Expect = 2e-16
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 179 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 121
>seq693
Length=185508
Score = 84.2 bits (92), Expect = 1e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || |||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 33022 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGTGAACCGGGAACAGCCCAGC 32964
Score = 84.2 bits (92), Expect = 1e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || |||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 87553 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGTGAACCGGGAACAGCCCAGC 87495
Score = 78.8 bits (86), Expect = 4e-13
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAG 58
|||||||||||| || |||||||||| |||||| |||||||||| ||||| |||||||
Sbjct 98470 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACTGCGAGTGAACCGGGAACAGCCCAG 98413
Score = 78.8 bits (86), Expect = 4e-13
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAG 58
|||||||||||| || |||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct 105926 GGAAAAGAAACTTACAAGGATTCCCTTAGTAATGGCGAGTGAACCGGGAACAGCCCAG 105869
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || |||||||||| |||||| |||||| ||| ||||| ||||||||
Sbjct 18757 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACTGCGAGTTAACCGGGAACAGCCCAGC 18699
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || |||||||||| ||||||||||||||||| |||| | ||||||
Sbjct 47398 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGTGAACCGGGAGCAACCCAGC 47340
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || |||||||||| ||||||||||||| ||| ||||| | ||||||
Sbjct 61163 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGTCAACCGGGAACAACCCAGC 61105
Score = 73.4 bits (80), Expect = 2e-11
Identities = 51/58 (88%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAG 58
|||||||||||| || |||||| ||| ||||||||||||||||| ||||| |||| ||
Sbjct 137546 GGAAAAGAAACTTACAAGGATTTCCTTAGTAACGGCGAGTGAACCGGGAATAGCCTAG 137489
Score = 71.6 bits (78), Expect = 6e-11
Identities = 45/49 (92%), Gaps = 0/49 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGA 49
|||||||||||| || |||||||||| ||||||||||||||||| ||||
Sbjct 66567 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGTGAACCGGGA 66519
>seq868
Length=65169
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| | |||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 2273 GGAAAAGAAACTTAAAAGGATTCCCTTAGTAACGGCGAGTGAACTGGGAACAGCCCAGC 2331
>seq443
Length=467088
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || |||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 210061 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 210119
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || |||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 254369 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 254427
Score = 71.6 bits (78), Expect = 6e-11
Identities = 50/57 (88%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57
|||||||||||| || |||||||||| |||||| | |||||||| ||||| ||||||
Sbjct 339461 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACAGTGAGTGAACCGGGAACAGCCCA 339517
>seq80
Length=1937898
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || |||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 1510350 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 1510408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230367915360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |