Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq14854 183 6e-44 seq62 183 6e-44 seq298 150 4e-34 seq815 143 5e-32 seq352 116 7e-24 seq354 111 3e-22 seq120 107 4e-21 seq51 107 4e-21 seq82 105 1e-20 seq130 102 2e-19 seq471 96.9 7e-18 seq107 93.3 8e-17 seq139 91.5 3e-16 seq283 86.0 1e-14 seq218 82.4 1e-13 seq18 77.0 6e-12 >seq14854 Length=155296 Score = 183 bits (202), Expect = 6e-44 Identities = 180/230 (78%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||||||||| ||||||||||| Sbjct 107730 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 107789 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | ||| ||| | || | | |||||||||||| ||||| Sbjct 107790 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 107848 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||| Sbjct 107849 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 107908 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 107909 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 107958 Score = 183 bits (202), Expect = 6e-44 Identities = 180/230 (78%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||||||||| ||||||||||| Sbjct 133304 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 133245 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | ||| ||| | || | | |||||||||||| ||||| Sbjct 133244 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 133186 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||| Sbjct 133185 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 133126 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 133125 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 133076 >seq62 Length=2166112 Score = 183 bits (202), Expect = 6e-44 Identities = 180/230 (78%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||||||||| ||||||||||| Sbjct 901682 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 901623 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | ||| ||| | || | | |||||||||||| ||||| Sbjct 901622 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 901564 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||| Sbjct 901563 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 901504 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 901503 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 901454 >seq298 Length=802456 Score = 150 bits (166), Expect = 4e-34 Identities = 173/229 (76%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||||||||| ||||||||||| Sbjct 18275 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 18334 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | ||| ||| | || | | |||||||||||| ||||| Sbjct 18335 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 18393 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||| ||||||||||| | || | ||||| ||| Sbjct 18394 GCTTGACTGCCAGACCCACCCGTCGAGCAGGTACGAAAGTCGGCCATAGTAATCCGACGG 18453 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGAT 338 || || ||||| |||||| |||| | ||||||||| ||| || ||||| Sbjct 18454 GGCCGAGTGGAAGGGCCGT-GCTCAAAGGATAAAAGTTACTCTAGGGAT 18501 >seq815 Length=92769 Score = 143 bits (158), Expect = 5e-32 Identities = 109/129 (84%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| ||||| | |||||||| | |||| ||| |||||||||||||||| Sbjct 74602 AGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCATCCGTCGAGCAGGGACGAAAGTC 74543 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 || |||| ||||||| |||||| || ||||| ||||||||||| ||||||||||| ||| Sbjct 74542 GGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACT 74483 Query 331 CTGGGGATA 339 || |||||| Sbjct 74482 CTAGGGATA 74474 >seq352 Length=636467 Score = 116 bits (128), Expect = 7e-24 Identities = 103/129 (80%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||| | ||||| | |||||||| | |||| | ||| || || |||||||||| Sbjct 239245 AGTGCAAAGGTAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGTAGAGACGAAAGTC 239186 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 || |||| ||||||| || ||| || ||||| || ||| ||| ||||||||||| ||| Sbjct 239185 GGCCTTAGTGATCCGACGATGCCGAGTGGAAGGGTTGTCACTCAACGGATAAAAGTTACT 239126 Query 331 CTGGGGATA 339 || |||||| Sbjct 239125 CTAGGGATA 239117 >seq354 Length=633104 Score = 111 bits (122), Expect = 3e-22 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| || | | ||||| ||||| | || ||||||| ||||| ||| | Sbjct 20221 GGGACAGTCTCCGGTAGATAGTTTCTATGGGGAGTAGGCATCCCAAAAGGTAACAGAGAC 20280 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | |||||| | || | | |||||| ||||| ||||| Sbjct 20281 GTGCAAAGGTTTCCTCGGGCATGATGGAGATTG-GCCCTCGAGTGCATAGGCAGAAGGGA 20339 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | ||| | ||| ||||| || |||||| || |||| |||| | | Sbjct 20340 GCTTGACTGCAAAACCTACCCGTCGAGCAGAGATGAAAGTTGGCCTTAGTGATGAGACAA 20399 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 20400 TGTCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 20449 >seq120 Length=1607711 Score = 107 bits (118), Expect = 4e-21 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169 ||||||| || || ||| ||||| ||||||||| |||||| ||||||||||||||| Sbjct 858468 CGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGG 858409 Query 170 CGCCCAAAGATACCCTCA-GCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGG 228 | | ||| || |||| ||| ||| | || || | || || | ||| Sbjct 858408 TGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGC-----GTAATGGTATAAGCC 858354 Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288 || |||||| || ||| | ||| | ||| |||||||||||| | || |||||||| Sbjct 858353 TGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGA 858294 Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || | | ||||| ||| |||||| |||||| |||| ||| | ||||||| Sbjct 858293 GTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATA 858243 >seq51 Length=2278663 Score = 107 bits (118), Expect = 4e-21 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| || || |||||||||| | |||| | || |||||||| ||||||| Sbjct 852765 AGTGCAAAGGCAGAAAGGAGTTTGACTGCTAAACCCACCCATCGAGCAGGGATGAAAGTC 852824 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 || |||| |||| || |||| || ||||| |||| || ||| || |||||||| ||| Sbjct 852825 GGCCTTAGTGATTCGATGGTGTCGAGTGGAAGGGCCATCACTCAACTGATAAAAGTTACT 852884 Query 331 CTGGGGATA 339 || | |||| Sbjct 852885 CTAGAGATA 852893 >seq82 Length=1932198 Score = 105 bits (116), Expect = 1e-20 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 148 GCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCG 207 |||||||||| ||||| ||||| ||||| | |||| | ||| || | || | Sbjct 109353 GCCTCCCAAAAGGTAACAAAGGCGTGCAAAGGTTTCCTCGGGCCGGACGGGGAT--TG-G 109409 Query 208 CAC---AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACG 264 | | |||||||| ||| || || | |||||||| | |||| | || | |||||||| Sbjct 109410 CCCTTGAGTGCAAAAGCAGAATGGAGCTTGACTGCAAGACCCACCCATCGAACAGGGACG 109469 Query 265 AAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAA 324 ||| ||| |||| ||||||| |||||| | ||||| || |||| ||| ||| |||||| Sbjct 109470 AAATGCGGCCTTAGTGATCCGACGGTGCCAATTGGAAGGGTCGTCACTCAACGAATAAAA 109529 Query 325 GCTACCCTGGGGATA 339 | ||| || |||||| Sbjct 109530 GTTACTCTAGGGATA 109544 >seq130 Length=1531558 Score = 102 bits (112), Expect = 2e-19 Identities = 122/163 (75%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||||||||| ||||||||||| Sbjct 37942 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 37883 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | ||| ||| | || | | |||||||||||| ||||| Sbjct 37882 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 37824 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGG 272 | |||| ||| | |||| | ||| |||||||||||||||||| Sbjct 37823 GCTTGATTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGG 37781 >seq471 Length=417244 Score = 96.9 bits (106), Expect = 7e-18 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 |||||| | | |||| | ||| ||| || ||||||||||| |||| ||||||| || | Sbjct 237119 TTGACTACAAGACCCACCTGTCGAGCTGGAACGAAAGTCGGCCTTAGTGATCCGATGGCG 237178 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||| ||||| | |||||||| ||||||||||| ||| || |||||| Sbjct 237179 CTGAGTGGAAGGTTCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 237226 >seq107 Length=1692442 Score = 93.3 bits (102), Expect = 8e-17 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| ||||| | || ||||| | |||| | ||| |||||||||||||||| Sbjct 1427082 AGTGCAAAGGCAGAAGGGAGCTTAACTGCAAGACCCACCAGTTGAGCAGGGACGAAAGTC 1427141 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGG 299 || |||| ||||||| |||||| || ||| Sbjct 1427142 GGCCTTACTGATCCGACGGTGCCGAGTGG 1427170 >seq139 Length=1479557 Score = 91.5 bits (100), Expect = 3e-16 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||| | |||| | || ||| ||||| | |||| | ||| ||||| ||||| Sbjct 1209426 GGGACAATCTCAGGTAGACAATTTCTATGGGGTGTAGGCCTTCGAAAAGGTAACAGAGGC 1209485 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 | | |||| | |||| | | |||||| | | | |||||||||| | || || | Sbjct 1209486 GTC-AAAGGTTTCCTC-GATCTGATGGAGATTGTTCCTCAAGTGCAAAGGTAGAAAGGAG 1209543 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 || | || | |||| | || ||||||||| ||||| |||| ||||| | ||| Sbjct 1209544 CTTAAAAGCAAGACCCACCCATCGAGCAGGGACATAAGTCAACCTTAGTGATCTGATGGT 1209603 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || || ||||| ||| |||| || ||||||||||| ||| || |||||| Sbjct 1209604 GCCGAGTGGAAGGGCTGTCGTTCAACGGATAAAAGTTACACTAGGGATA 1209652 >seq283 Length=849512 Score = 86.0 bits (94), Expect = 1e-14 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||| | ||||| |||||||||| |||||| | ||| || ||| ||||||||| Sbjct 176361 AGTGCAAAGGTAGAAGGGAGTTTGACTGCAACACCCACCTGTCGAGTAGGAACGAAAGTC 176302 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 | ||| ||||||| | || | ||||| | | ||| ||||||||||| ||| Sbjct 176301 GACTTTAGTGATCCGATGATGTCAAGTGGAAGGATATTGACTCAACGGATAAAAGTTACT 176242 Query 331 CTGGGGA 337 || |||| Sbjct 176241 CTAGGGA 176235 >seq218 Length=1093294 Score = 82.4 bits (90), Expect = 1e-13 Identities = 100/131 (76%), Gaps = 4/131 (3%) Strand=Plus/Minus Query 164 CGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCA 222 |||||||| ||||| | |||||| | ||| ||| | || | | ||||| |||||| Sbjct 963834 CGGAGGCGTGCAAAGGTTTCCTCAGGTCGGACGGAGATTG-GCCCTCGAGTGCGAAGGCA 963776 Query 223 AAAGGGTGTTTGACTGCGACACCC-TCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGA 281 ||||| | |||||||| | |||| || | || |||||||||||||||||| |||| || Sbjct 963775 GAAGGGAGCTTGACTGCAAGACCCATCCA-TCGAGCAGGGACGAAAGTCGGCCTTAGCGA 963717 Query 282 TCCGGCGGTGC 292 |||| ||| || Sbjct 963716 TCCGACGGGGC 963706 >seq18 Length=3280163 Score = 77.0 bits (84), Expect = 6e-12 Identities = 81/107 (76%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 |||||| || ||| | ||| | ||| |||||||||||| | || |||||||| || | Sbjct 609535 TGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCC 609476 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | ||||| ||| |||||| |||||| |||| ||| | ||||||| Sbjct 609475 CGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATA 609429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982254074304