Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19]
14,854 sequences; 705,934,411 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq14854 183 6e-44
seq62 183 6e-44
seq298 150 4e-34
seq815 143 5e-32
seq352 116 7e-24
seq354 111 3e-22
seq120 107 4e-21
seq51 107 4e-21
seq82 105 1e-20
seq130 102 2e-19
seq471 96.9 7e-18
seq107 93.3 8e-17
seq139 91.5 3e-16
seq283 86.0 1e-14
seq218 82.4 1e-13
seq18 77.0 6e-12
>seq14854
Length=155296
Score = 183 bits (202), Expect = 6e-44
Identities = 180/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 107730 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 107789
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 107790 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 107848
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||
Sbjct 107849 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 107908
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 107909 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 107958
Score = 183 bits (202), Expect = 6e-44
Identities = 180/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 133304 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 133245
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 133244 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 133186
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||
Sbjct 133185 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 133126
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 133125 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 133076
>seq62
Length=2166112
Score = 183 bits (202), Expect = 6e-44
Identities = 180/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 901682 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 901623
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 901622 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 901564
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||
Sbjct 901563 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 901504
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 901503 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 901454
>seq298
Length=802456
Score = 150 bits (166), Expect = 4e-34
Identities = 173/229 (76%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 18275 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 18334
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 18335 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 18393
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||| ||||||||||| | || | ||||| |||
Sbjct 18394 GCTTGACTGCCAGACCCACCCGTCGAGCAGGTACGAAAGTCGGCCATAGTAATCCGACGG 18453
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGAT 338
|| || ||||| |||||| |||| | ||||||||| ||| || |||||
Sbjct 18454 GGCCGAGTGGAAGGGCCGT-GCTCAAAGGATAAAAGTTACTCTAGGGAT 18501
>seq815
Length=92769
Score = 143 bits (158), Expect = 5e-32
Identities = 109/129 (84%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||| ||||| | |||||||| | |||| ||| ||||||||||||||||
Sbjct 74602 AGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCATCCGTCGAGCAGGGACGAAAGTC 74543
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
|| |||| ||||||| |||||| || ||||| ||||||||||| ||||||||||| |||
Sbjct 74542 GGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACT 74483
Query 331 CTGGGGATA 339
|| ||||||
Sbjct 74482 CTAGGGATA 74474
>seq352
Length=636467
Score = 116 bits (128), Expect = 7e-24
Identities = 103/129 (80%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||| | ||||| | |||||||| | |||| | ||| || || ||||||||||
Sbjct 239245 AGTGCAAAGGTAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGTAGAGACGAAAGTC 239186
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
|| |||| ||||||| || ||| || ||||| || ||| ||| ||||||||||| |||
Sbjct 239185 GGCCTTAGTGATCCGACGATGCCGAGTGGAAGGGTTGTCACTCAACGGATAAAAGTTACT 239126
Query 331 CTGGGGATA 339
|| ||||||
Sbjct 239125 CTAGGGATA 239117
>seq354
Length=633104
Score = 111 bits (122), Expect = 3e-22
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| || | | ||||| ||||| | || ||||||| ||||| ||| |
Sbjct 20221 GGGACAGTCTCCGGTAGATAGTTTCTATGGGGAGTAGGCATCCCAAAAGGTAACAGAGAC 20280
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | |||||| | || | | |||||| ||||| |||||
Sbjct 20281 GTGCAAAGGTTTCCTCGGGCATGATGGAGATTG-GCCCTCGAGTGCATAGGCAGAAGGGA 20339
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | ||| | ||| ||||| || |||||| || |||| |||| | |
Sbjct 20340 GCTTGACTGCAAAACCTACCCGTCGAGCAGAGATGAAAGTTGGCCTTAGTGATGAGACAA 20399
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 20400 TGTCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 20449
>seq120
Length=1607711
Score = 107 bits (118), Expect = 4e-21
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169
||||||| || || ||| ||||| ||||||||| |||||| |||||||||||||||
Sbjct 858468 CGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGG 858409
Query 170 CGCCCAAAGATACCCTCA-GCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGG 228
| | ||| || |||| ||| ||| | || || | || || | |||
Sbjct 858408 TGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGC-----GTAATGGTATAAGCC 858354
Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288
|| |||||| || ||| | ||| | ||| |||||||||||| | || ||||||||
Sbjct 858353 TGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGA 858294
Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| | | ||||| ||| |||||| |||||| |||| ||| | |||||||
Sbjct 858293 GTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATA 858243
>seq51
Length=2278663
Score = 107 bits (118), Expect = 4e-21
Identities = 101/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||| || || |||||||||| | |||| | || |||||||| |||||||
Sbjct 852765 AGTGCAAAGGCAGAAAGGAGTTTGACTGCTAAACCCACCCATCGAGCAGGGATGAAAGTC 852824
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
|| |||| |||| || |||| || ||||| |||| || ||| || |||||||| |||
Sbjct 852825 GGCCTTAGTGATTCGATGGTGTCGAGTGGAAGGGCCATCACTCAACTGATAAAAGTTACT 852884
Query 331 CTGGGGATA 339
|| | ||||
Sbjct 852885 CTAGAGATA 852893
>seq82
Length=1932198
Score = 105 bits (116), Expect = 1e-20
Identities = 142/195 (73%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 148 GCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCG 207
|||||||||| ||||| ||||| ||||| | |||| | ||| || | || |
Sbjct 109353 GCCTCCCAAAAGGTAACAAAGGCGTGCAAAGGTTTCCTCGGGCCGGACGGGGAT--TG-G 109409
Query 208 CAC---AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACG 264
| | |||||||| ||| || || | |||||||| | |||| | || | ||||||||
Sbjct 109410 CCCTTGAGTGCAAAAGCAGAATGGAGCTTGACTGCAAGACCCACCCATCGAACAGGGACG 109469
Query 265 AAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAA 324
||| ||| |||| ||||||| |||||| | ||||| || |||| ||| ||| ||||||
Sbjct 109470 AAATGCGGCCTTAGTGATCCGACGGTGCCAATTGGAAGGGTCGTCACTCAACGAATAAAA 109529
Query 325 GCTACCCTGGGGATA 339
| ||| || ||||||
Sbjct 109530 GTTACTCTAGGGATA 109544
>seq130
Length=1531558
Score = 102 bits (112), Expect = 2e-19
Identities = 122/163 (75%), Gaps = 2/163 (1%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 37942 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 37883
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 37882 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 37824
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGG 272
| |||| ||| | |||| | ||| ||||||||||||||||||
Sbjct 37823 GCTTGATTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGG 37781
>seq471
Length=417244
Score = 96.9 bits (106), Expect = 7e-18
Identities = 86/108 (80%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291
|||||| | | |||| | ||| ||| || ||||||||||| |||| ||||||| || |
Sbjct 237119 TTGACTACAAGACCCACCTGTCGAGCTGGAACGAAAGTCGGCCTTAGTGATCCGATGGCG 237178
Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|||| ||||| | |||||||| ||||||||||| ||| || ||||||
Sbjct 237179 CTGAGTGGAAGGTTCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 237226
>seq107
Length=1692442
Score = 93.3 bits (102), Expect = 8e-17
Identities = 74/89 (83%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||| ||||| | || ||||| | |||| | ||| ||||||||||||||||
Sbjct 1427082 AGTGCAAAGGCAGAAGGGAGCTTAACTGCAAGACCCACCAGTTGAGCAGGGACGAAAGTC 1427141
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGG 299
|| |||| ||||||| |||||| || |||
Sbjct 1427142 GGCCTTACTGATCCGACGGTGCCGAGTGG 1427170
>seq139
Length=1479557
Score = 91.5 bits (100), Expect = 3e-16
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||| | |||| | || ||| ||||| | |||| | ||| ||||| |||||
Sbjct 1209426 GGGACAATCTCAGGTAGACAATTTCTATGGGGTGTAGGCCTTCGAAAAGGTAACAGAGGC 1209485
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230
| | |||| | |||| | | |||||| | | | |||||||||| | || || |
Sbjct 1209486 GTC-AAAGGTTTCCTC-GATCTGATGGAGATTGTTCCTCAAGTGCAAAGGTAGAAAGGAG 1209543
Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290
|| | || | |||| | || ||||||||| ||||| |||| ||||| | |||
Sbjct 1209544 CTTAAAAGCAAGACCCACCCATCGAGCAGGGACATAAGTCAACCTTAGTGATCTGATGGT 1209603
Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| || ||||| ||| |||| || ||||||||||| ||| || ||||||
Sbjct 1209604 GCCGAGTGGAAGGGCTGTCGTTCAACGGATAAAAGTTACACTAGGGATA 1209652
>seq283
Length=849512
Score = 86.0 bits (94), Expect = 1e-14
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||| | ||||| |||||||||| |||||| | ||| || ||| |||||||||
Sbjct 176361 AGTGCAAAGGTAGAAGGGAGTTTGACTGCAACACCCACCTGTCGAGTAGGAACGAAAGTC 176302
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
| ||| ||||||| | || | ||||| | | ||| ||||||||||| |||
Sbjct 176301 GACTTTAGTGATCCGATGATGTCAAGTGGAAGGATATTGACTCAACGGATAAAAGTTACT 176242
Query 331 CTGGGGA 337
|| ||||
Sbjct 176241 CTAGGGA 176235
>seq218
Length=1093294
Score = 82.4 bits (90), Expect = 1e-13
Identities = 100/131 (76%), Gaps = 4/131 (3%)
Strand=Plus/Minus
Query 164 CGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCA 222
|||||||| ||||| | |||||| | ||| ||| | || | | ||||| ||||||
Sbjct 963834 CGGAGGCGTGCAAAGGTTTCCTCAGGTCGGACGGAGATTG-GCCCTCGAGTGCGAAGGCA 963776
Query 223 AAAGGGTGTTTGACTGCGACACCC-TCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGA 281
||||| | |||||||| | |||| || | || |||||||||||||||||| |||| ||
Sbjct 963775 GAAGGGAGCTTGACTGCAAGACCCATCCA-TCGAGCAGGGACGAAAGTCGGCCTTAGCGA 963717
Query 282 TCCGGCGGTGC 292
|||| ||| ||
Sbjct 963716 TCCGACGGGGC 963706
>seq18
Length=3280163
Score = 77.0 bits (84), Expect = 6e-12
Identities = 81/107 (76%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292
|||||| || ||| | ||| | ||| |||||||||||| | || |||||||| || |
Sbjct 609535 TGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCC 609476
Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| ||||| ||| |||||| |||||| |||| ||| | |||||||
Sbjct 609475 CGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATA 609429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982254074304
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