Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq14854 107 2e-21 seq354 107 2e-21 seq62 107 2e-21 seq150 91.5 2e-16 seq298 89.7 6e-16 seq608 84.2 2e-14 seq82 80.6 3e-13 >seq14854 Length=155296 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 107570 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 107511 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 107510 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 107452 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 107451 ACAAGGAATTTCGCTACCTTAGGACCGTTA 107422 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 133464 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 133523 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 133524 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 133582 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 133583 ACAAGGAATTTCGCTACCTTAGGACCGTTA 133612 >seq354 Length=633104 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 20061 GGGTCTTTCTGTCCAGGTGCAGGTAGTCTGCATCTTCACAGACATGTCTATTTCACCGAG 20002 Query 85 C-TCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | |||| ||||||| ||| || ||| ||| |||||||||||||||| Sbjct 20001 CCTCACTCC-GAGACAGTGCCTATATCGTTACGCCTTTCATGCGGGTCGGAACTTACCCG 19943 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 19942 ACAAGGAATTTCGCTACCTTAGGACCGTTA 19913 >seq62 Length=2166112 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 901842 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 901901 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 901902 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 901960 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 901961 ACAAGGAATTTCGCTACCTTAGGACCGTTA 901990 >seq150 Length=1428744 Score = 91.5 bits (100), Expect = 2e-16 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 114 ACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || || ||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 879934 ACGCCTTTCGTACGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 879993 >seq298 Length=802456 Score = 89.7 bits (98), Expect = 6e-16 Identities = 109/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| | || |||| || |||||||||| || | | |||||| ||| Sbjct 18115 GGGTCTTTCTGTCCAAGTGCAGGTAGTCCGCATCTTCACAGACATGATTATTTCAACGAG 18056 Query 85 CTCACGGT-TGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | |||||||| ||| || ||| ||| | |||||| | ||| | Sbjct 18055 C-CTCTCTCTGAGACAGTGCCCAGATCGTTACGCCTTTCTTGCGGATCGGAAATCACCTG 17997 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 17996 ACAAGGAATTTCGCTACCTTAGGACCGTTA 17967 >seq608 Length=253366 Score = 84.2 bits (92), Expect = 2e-14 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct 171595 TACACCATTCGTGCAGGTCGCTACTTATGTGACAAGGAATTTCGCTACCTTAGGACAGTT 171654 Query 173 A 173 | Sbjct 171655 A 171655 >seq82 Length=1932198 Score = 80.6 bits (88), Expect = 3e-13 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 120 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||| |||||||| |||||||| |||||||||||||||||||||||| ||| Sbjct 106144 TTCGTGCGGGTCGGAAGTTACCCGATAAGGAATTTCGCTACCTTAGGACCATTA 106091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547121258946