Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq14854 87.8 1e-15 seq62 87.8 1e-15 seq815 82.4 5e-14 >seq14854 Length=155296 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 107947 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 107888 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 107887 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 107830 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 133087 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 133146 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 133147 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 133204 >seq62 Length=2166112 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 901465 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 901524 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 901525 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 901582 >seq815 Length=92769 Score = 82.4 bits (90), Expect = 5e-14 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 74485 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 74544 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | | | ||| ||| |||||| | ||| |||| ||||||| Sbjct 74545 CTTTCGTCCCTGCTCGACGGATGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 74602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351950981800