Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq14854 138 2e-30 seq298 138 2e-30 seq62 138 2e-30 seq142 95.1 2e-17 seq842 91.5 3e-16 seq330 80.6 5e-13 seq168 80.6 5e-13 seq465 77.0 6e-12 seq99 73.4 7e-11 >seq14854 Length=155296 Score = 138 bits (152), Expect = 2e-30 Identities = 179/243 (74%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||| Sbjct 105512 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAATCGACGAAATGCTTCGGG 105571 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| ||| |||| ||| | Sbjct 105572 GAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGGCAACC------TTTCGAA 105624 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 105625 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 105681 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 105682 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 105741 Query 249 CCT 251 ||| Sbjct 105742 CCT 105744 Score = 138 bits (152), Expect = 2e-30 Identities = 179/243 (74%), Gaps = 11/243 (5%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||| Sbjct 135522 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAATCGACGAAATGCTTCGGG 135463 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| ||| |||| ||| | Sbjct 135462 GAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGGCAACC------TTTCGAA 135410 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 135409 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 135353 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 135352 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 135293 Query 249 CCT 251 ||| Sbjct 135292 CCT 135290 >seq298 Length=802456 Score = 138 bits (152), Expect = 2e-30 Identities = 179/243 (74%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||| Sbjct 7123 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAATCGACGAAATGCTTCGGG 7182 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| ||| |||| ||| | Sbjct 7183 GAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGGCAACC------TTTCGAA 7235 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 7236 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 7292 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 7293 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 7352 Query 249 CCT 251 ||| Sbjct 7353 CCT 7355 Score = 98.7 bits (108), Expect = 2e-18 Identities = 171/243 (70%), Gaps = 13/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || || ||||| ||||||| || | ||| |||| Sbjct 16059 GGTGGATACCTAGGCACCCAGAGAGGAGGAAGGGCGTAGTAATCGATGAAATGCTTCGGG 16118 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| ||| | ||||| | ||| | Sbjct 16119 GAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGTA---GGAAAACT-----TTTCGAA 16169 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| || ||||||||||||| ||| Sbjct 16170 C--TGC-TGCTGAATCCATGGGAAGGCAAGAGACAACTTGGAAAACTGAAACATCTTAGT 16226 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| ||||||||||||| || || Sbjct 16227 AGCCAGAGGAAAAGAAAGCAAAAGTGATTCCCGTAGTAGCGGCGAGCGAAATGAGAGCAG 16286 Query 249 CCT 251 ||| Sbjct 16287 CCT 16289 >seq62 Length=2166112 Score = 138 bits (152), Expect = 2e-30 Identities = 179/243 (74%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||| Sbjct 790946 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAATCGACGAAATGCTTCGGG 791005 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| ||| |||| ||| | Sbjct 791006 GAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGGCAACC------TTTCGAA 791058 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 791059 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 791115 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 791116 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 791175 Query 249 CCT 251 ||| Sbjct 791176 CCT 791178 Score = 138 bits (152), Expect = 2e-30 Identities = 179/243 (74%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||| Sbjct 791524 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAATCGACGAAATGCTTCGGG 791583 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| ||| |||| ||| | Sbjct 791584 GAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGGCAACC------TTTCGAA 791636 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 791637 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 791693 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 791694 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 791753 Query 249 CCT 251 ||| Sbjct 791754 CCT 791756 Score = 138 bits (152), Expect = 2e-30 Identities = 179/243 (74%), Gaps = 11/243 (5%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||| Sbjct 904387 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAATCGACGAAATGCTTCGGG 904328 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| ||| |||| ||| | Sbjct 904327 GAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGGCAACC------TTTCGAA 904275 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 904274 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 904218 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 904217 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 904158 Query 249 CCT 251 ||| Sbjct 904157 CCT 904155 >seq142 Length=1446147 Score = 95.1 bits (104), Expect = 2e-17 Identities = 87/109 (80%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195 |||||||| ||| || | |||| || |||| |||||||||||| |||| |||||| | Sbjct 627986 TGCTGAATCCATGGGCAGGCAAGAGAGAACCAGGCGAACTGAAAGATCTTAGTAGCCAGA 627927 Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGA 244 |||||||| | ||| | ||||||| ||||| |||| ||||||||||| Sbjct 627926 GGAAAAGATAGCAAAAGTGATTCCCGTAGTAGCGGCGGGCGAAATGGGA 627878 >seq842 Length=77229 Score = 91.5 bits (100), Expect = 3e-16 Identities = 164/234 (70%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 12 TGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGA 71 ||||| ||| ||| | || | | ||||||||||||| ||| | ||| | |||| Sbjct 63359 TGGATACCTAGGCACCCAGAGACAAGGAAGGACGTAGTAATCGACGAAATGCTTCAGGGA 63418 Query 72 GTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTCA 131 || | ||| | | | ||| || ||||| |||||| ||| ||| ||| | | Sbjct 63419 GTT-GAAAATAAGCATAGATTCGGAGATTCCCGAATAGGGCAACT------TTTCGAAC- 63470 Query 132 TTGCATGCTGAATACATAGGTATGCAAA-GCGAACGCGGCGAACTGAAACATCTAAGTAG 190 ||| |||| ||| ||| || | ||||| | ||| ||||||||||||||| | |||| Sbjct 63471 -TGC-TGCTAAATCCATGGGCAGGCAAAAGACAACCTGGCGAACTGAAACATA-AGGTAG 63527 Query 191 CTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGA 244 ||||||||||| ||| | ||||||| ||||| ||||||||||| |||| Sbjct 63528 TCAGAGGAAAAGAAAGCAAAAGCAATTCCCATAGTAGCGGCGAGCGAAACGGGA 63581 >seq330 Length=691502 Score = 80.6 bits (88), Expect = 5e-13 Identities = 85/109 (78%), Gaps = 5/109 (5%) Strand=Plus/Plus Query 146 CATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAG--GAAAAG 202 ||| || | |||| || ||| ||||||||||||||||| |||||| ||| |||||| Sbjct 545521 CATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGC--CAGGAGAAAAG 545578 Query 203 AAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 ||| ||| | ||||||| ||||| ||| ||| |||||||| ||||| Sbjct 545579 AAAACAAAAGTGATTCCCGTAGTAGCGGCAAGCAAAATGGGAGCAGCCT 545627 >seq168 Length=1305409 Score = 80.6 bits (88), Expect = 5e-13 Identities = 85/111 (77%), Gaps = 1/111 (1%) Strand=Plus/Minus Query 142 AATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAA 200 ||| ||| || | |||| || ||| |||||||| |||||||| |||||| |||||| Sbjct 1147542 AATCCATGGGCAGGCAAGAGACAACCTGGCGAACTAAAACATCTTAGTAGCCAGAGGAAA 1147483 Query 201 AGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 ||||| ||| | ||||| | ||||| ||||| |||||| ||| ||||| Sbjct 1147482 AGAAAGCAAAAGCGATTCTCGTAGTAGCGGCGAACGAAATAGGAGCAGCCT 1147432 >seq465 Length=430846 Score = 77.0 bits (84), Expect = 6e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 |||||||||||||||| ||||||| ||||| |||||||||||||| || ||||| Sbjct 212889 GCGAACTGAAACATCTTAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 212830 Query 229 GGCGAGCGAAATGGGAT 245 ||||||||| | |||| Sbjct 212829 GGCGAGCGAGAGCGGAT 212813 >seq99 Length=1753773 Score = 73.4 bits (80), Expect = 7e-11 Identities = 67/84 (80%), Gaps = 7/84 (8%) Strand=Plus/Plus Query 168 GGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227 ||||||||||||||||| ||||| ||||||||||| ||| | ||||||| |||| Sbjct 1349911 GGCGAACTGAAACATCTTAGTAG----AGGAAAAGAAAGCAAAAGTGATTCCC---GTAG 1349963 Query 228 TGGCGAGCGAAATGGGATGAGCCT 251 | ||||| |||||||| ||||| Sbjct 1349964 TAGCGAGAAAAATGGGAGCAGCCT 1349987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918263580864