Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq443 111 3e-22 seq80 111 3e-22 seq425 100 5e-19 seq1134 95.1 2e-17 seq115 91.5 2e-16 seq34 91.5 2e-16 >seq443 Length=467088 Score = 111 bits (122), Expect = 3e-22 Identities = 100/123 (81%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | ||||||| | ||| || ||| || |||| Sbjct 195099 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 195156 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | |||||||||||| |||||||||||||||||||||||| || | Sbjct 195157 GGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 195216 Query 121 GAA 123 ||| Sbjct 195217 GAA 195219 Score = 111 bits (122), Expect = 3e-22 Identities = 100/123 (81%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | ||||||| | ||| || ||| || |||| Sbjct 401605 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 401662 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | |||||||||||| |||||||||||||||||||||||| || | Sbjct 401663 GGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 401722 Query 121 GAA 123 ||| Sbjct 401723 GAA 401725 Score = 107 bits (118), Expect = 3e-21 Identities = 99/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| || |||||||| || |||| | |||||||| | ||| || ||| || |||| Sbjct 268810 GTAAGACAGGAACCGTTGA-TTCACA-TAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 268867 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | |||||||||||| |||||||||||||||||||||||| || | Sbjct 268868 GGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 268927 Query 121 GAA 123 ||| Sbjct 268928 GAA 268930 Score = 102 bits (112), Expect = 1e-19 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||||| || |||| | |||||||| | ||| || ||| || |||| Sbjct 416161 GTAAGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 416218 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||| |||||||| || |||||||||| ||||||||||||||| |||||| | || | Sbjct 416219 GGCGCGATGCTACCATATGTTGGATTATGGATGAACGCCTCTAAGTTAGAATCTAGGCAA 416278 Query 121 GAA 123 ||| Sbjct 416279 GAA 416281 Score = 95.1 bits (104), Expect = 2e-17 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATT 86 ||||||||| | ||| || ||| || ||||| |||||||||||||| || |||||| Sbjct 360415 ATAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCATGTGTTGGATT 360474 Query 87 ATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 ||| ||||||||||||||| |||||||| || |||| Sbjct 360475 ATGAATGAACGCCTCTAAGTTAGAATCCAGGCAAGAA 360511 Score = 89.7 bits (98), Expect = 8e-16 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||||| ||||| | ||||| || | || || ||| || |||| Sbjct 357889 GTAAGAGAGGAACCGTT-AATTCCCA-TAATTTGTCATCCCGCTTGGTTGAAAAGCCAGT 357946 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | |||||||||| | |||| ||||||| |||||||||||||||| |||||||| || | Sbjct 357947 GGCACGAAGCTACCGTGTGCTAGATTATGACTGAACGCCTCTAAGTGAGAATCCAGGCAA 358006 Query 121 GAA 123 ||| Sbjct 358007 GAA 358009 Score = 86.0 bits (94), Expect = 1e-14 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||||| |||||||||||||| || ||||||||| ||||||||||||||| |||||| Sbjct 197805 AGCCAGTGGCGCGAAGCTACCATGTGTTGGATTATGAATGAACGCCTCTAAGTTAGAATC 197864 Query 114 CATGCCAGAA 123 || || |||| Sbjct 197865 CAGGCAAGAA 197874 Score = 84.2 bits (92), Expect = 4e-14 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||||| |||||| | ||||| || | | || ||| || |||| Sbjct 219564 GTAAGAGAGGAACCGTT-AATTCACA-TAATTTGTCATCCCTCTTGGTTGAAAAGCCAGT 219621 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | ||||||||| | | |||||||||| |||||||||||||||||||||| || || | Sbjct 219622 GGCATGAAGCTACCGTGTCCTGGATTATGACTGAACGCCTCTAAGTCAGAATACAGGCAA 219681 Query 121 GAA 123 ||| Sbjct 219682 GAA 219684 Score = 84.2 bits (92), Expect = 4e-14 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||||| ||||| | |||||| || | || || ||| || |||| Sbjct 266254 GTAAGAGAGGAACCGTT-AATTC-GCATAATTTGTCATCCCGCTTGGTTGAAAAGCCAGT 266311 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | ||| ||||| | |||||||||||| ||||||||||||||||||||| || || | Sbjct 266312 GGCATGAATCTACCGTGTGCTGGATTATGATTGAACGCCTCTAAGTCAGAATTCAGGCAA 266371 Query 121 GAA 123 ||| Sbjct 266372 GAA 266374 Score = 84.2 bits (92), Expect = 4e-14 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||||| ||||| | |||||| || | || || ||| || || Sbjct 411026 GTAAGAGAGGAACCGTT-AATTC-GCATAATTTGTAATCCCGCTTGGTTGAAAAGCTGGT 411083 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | |||||||||| | |||||||||||| ||||| ||||||||||| ||||||| || | Sbjct 411084 GGCACGAAGCTACCGTGTGCTGGATTATGACTGAATGCCTCTAAGTCTGAATCCAGGCAA 411143 Query 121 GAA 123 ||| Sbjct 411144 GAA 411146 Score = 84.2 bits (92), Expect = 4e-14 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||||| ||||| | |||||| || | || || ||| || || Sbjct 427976 GTAAGAGAGGAACCGTT-AATTC-GCATAATTTGTAATCCCGCTTGGTTGAAAAGCTGGT 428033 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | |||||||||| | |||||||||||| ||||||||||||||||| |||| || || | Sbjct 428034 GGCACGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCTGAATTCAGGCAA 428093 Query 121 GAA 123 ||| Sbjct 428094 GAA 428096 Score = 80.6 bits (88), Expect = 4e-13 Identities = 93/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||||| ||||| | |||||| || | || || ||| || |||| Sbjct 383137 GTAAGAGAGGAACCGTT-AATTC-GCATAATTTGTCATCCCGCTTGGTTGAAAAGCCAGT 383194 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | |||| ||| | || ||||||||| ||||||||||| ||||||||||||| || | Sbjct 383195 GGCACGAAACTAGTGTGTGTTGGATTATGACTGAACGCCTCAAAGTCAGAATCCAGGCAA 383254 Query 121 GAA 123 ||| Sbjct 383255 GAA 383257 >seq80 Length=1937898 Score = 111 bits (122), Expect = 3e-22 Identities = 100/123 (81%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | ||||||| | ||| || ||| || |||| Sbjct 1513319 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 1513376 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | |||||||||||| |||||||||||||||||||||||| || | Sbjct 1513377 GGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 1513436 Query 121 GAA 123 ||| Sbjct 1513437 GAA 1513439 >seq425 Length=498817 Score = 100 bits (110), Expect = 5e-19 Identities = 95/119 (80%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 5 GAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCG 64 ||||||||||| || |||| | ||||| || | ||| || ||| || ||||| || Sbjct 485631 GAGAGGAACCGTTGA-TTCACA-TAATTAGTCATCGCGCTTGGTTGAAAAGCCAGTGGCG 485574 Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 |||||||||||| || ||||||||| ||||||||||||||| |||||||| || |||| Sbjct 485573 CGAAGCTACCATGTGTTGGATTATGAATGAACGCCTCTAAGTTAGAATCCAGGCAAGAA 485515 Score = 98.7 bits (108), Expect = 2e-18 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||| || || || |||| | |||||||| | ||| || ||| | |||| Sbjct 291628 GTAAGAGAGAAATCGTTGA-TTCACA-TAATTGGTCATCACGGTTGGTTGAAAACCCAGT 291571 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| |||||||||||| |||||| |||||||||||||||||| | | Sbjct 291570 GGCGCGAAGCTACCATGTGCTGGATTATGACTGAACACCTCTAAGTCAGAATCCAGGTAA 291511 Query 121 GAA 123 ||| Sbjct 291510 GAA 291508 Score = 98.7 bits (108), Expect = 2e-18 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||||| || |||| | ||||| || | ||| || ||| || ||| Sbjct 455839 GTAAGAGAGGAACCGTTGA-TTCACA-TAATTAGTCATCGCGCTTGGTTGAAAAGCTAGT 455782 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| || ||||||||| |||||||||| ||||||||||||| || | Sbjct 455781 GGCGCGAAGCTACCATGTGTTGGATTATGAATGAACGCCTCAAAGTCAGAATCCAGGCAA 455722 Query 121 GAA 123 ||| Sbjct 455721 GAA 455719 Score = 95.1 bits (104), Expect = 2e-17 Identities = 94/119 (79%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 5 GAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCG 64 ||||||||||| || |||| | ||||| || | ||| || ||| || ||||| || Sbjct 476728 GAGAGGAACCGTTGA-TTCACA-TAATTAGTCATCGCGCTTGGTTGAAAAGCCAGTGGCG 476671 Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 ||||| |||||| || ||||||||| |||||||||| ||||||||||||| || |||| Sbjct 476670 CGAAGATACCATTTGTTGGATTATGAATGAACGCCTCAAAGTCAGAATCCAGGCAAGAA 476612 Score = 86.0 bits (94), Expect = 1e-14 Identities = 93/121 (77%), Gaps = 3/121 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||| | || || |||||| || | ||| || ||| || |||| Sbjct 490587 GTAAGAGAGGAACTGTAGATTTAC--ATAATTAGTCATCGCGCTTGGTTGAA-AGCCAGT 490531 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| || ||||||||| |||||||||| ||||||||||||| || | Sbjct 490530 GGCGCGAAGCTACCATGTGTTGGATTATGAATGAACGCCTCAAAGTCAGAATCCAGGCAA 490471 Query 121 G 121 | Sbjct 490470 G 490470 Score = 82.4 bits (90), Expect = 1e-13 Identities = 93/122 (76%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 5 GAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCG 64 ||||||||||| || |||| ||||||| || | || | |||| || ||||| | Sbjct 460237 GAGAGGAACCGTTGA-TTCA-AATAATTTGTCATCCCGTTAGGCTGAAAAGTCAGTGGCA 460180 Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAAC 124 |||||||||| | | ||| ||||| ||||||| |||||||||||||||| || |||| Sbjct 460179 CGAAGCTACCGTATTCTGTATTATTACTGAACGTCTCTAAGTCAGAATCCGGGCAAGAAG 460120 Query 125 GG 126 || Sbjct 460119 GG 460118 Score = 78.8 bits (86), Expect = 2e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||| | ||||||||| | |||||||||||| |||||||||||||||||||||||| Sbjct 441167 CAGTGGCAAGAAGCTACCTTATGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCC 441110 >seq1134 Length=21339 Score = 95.1 bits (104), Expect = 2e-17 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATT 86 ||||||||| | ||| || ||| || ||||| |||||||||||||| || |||||| Sbjct 13259 ATAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCATGTGTTGGATT 13200 Query 87 ATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 ||| ||||||||||||||| |||||||| || |||| Sbjct 13199 ATGAATGAACGCCTCTAAGTTAGAATCCAGGCAAGAA 13163 Score = 89.7 bits (98), Expect = 8e-16 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||||| |||||| | ||||| || | || || ||| || |||| Sbjct 15953 GTAAGAGAGGAACCGTT-AATTCACA-TAATTTGTCATCCCGCTTGGTTGAAAAGCCAGT 15896 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | |||||||| | | |||| ||||||| ||||||| ||||||||||||||||| || | Sbjct 15895 GGCACGAAGCTATCGTGTGCTCGATTATGACTGAACGTCTCTAAGTCAGAATCCAGGCAA 15836 Query 121 GAA 123 ||| Sbjct 15835 GAA 15833 >seq115 Length=1638671 Score = 91.5 bits (100), Expect = 2e-16 Identities = 89/112 (79%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 || ||||||||| || || |||| | ||||||| | || || ||| || |||| Sbjct 214650 GTGCGAGAGGAAACGTTGA-TTCACAC-AATTGGTCATCACGCTTGGTTGAAAAGCCAGT 214593 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 | |||||||||||||| |||| ||||||| |||||||||||||||||||||| Sbjct 214592 GGCGCGAAGCTACCATGTGCTAGATTATGACTGAACGCCTCTAAGTCAGAAT 214541 Score = 84.2 bits (92), Expect = 4e-14 Identities = 88/113 (78%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | || |||| | || |||| | ||| || ||| || | || Sbjct 14977 GTACGAGAGGAACTGTTGA-TTCACAC-AACTGGTCATCGCGCTTGGTTGAAAAGTCGGT 14920 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | |||||||||||||| || ||||||||| |||| ||||||||||||||||| Sbjct 14919 GGCGCGAAGCTACCATGTGATGGATTATGATTGAATGCCTCTAAGTCAGAATC 14867 >seq34 Length=2637368 Score = 91.5 bits (100), Expect = 2e-16 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||||| |||||||||||| | |||||||||||| ||||||||||||||||||||||| Sbjct 2503564 AGTCAGTGGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATC 2503505 Query 114 CATGC 118 || || Sbjct 2503504 CAGGC 2503500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819082118656