Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq7442 91.5 2e-16 seq2751 87.8 2e-15 seq1592 87.8 2e-15 seq224 87.8 2e-15 >seq7442 Length=2782 Score = 91.5 bits (100), Expect = 2e-16 Identities = 122/166 (73%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| ||| || ||| || | | | |||| Sbjct 970 AAACCGACACAGGTAGGTAGGTAGAGAATACCTAGGGGCGCGAGACAA-CTCTCTCTAAG 912 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| || || Sbjct 911 GAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--GGGGG 854 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 |||| || ||| || ||| |||||||| |||||||||||| || Sbjct 853 TTGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 808 >seq2751 Length=47027 Score = 87.8 bits (96), Expect = 2e-15 Identities = 121/166 (73%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| ||| || ||| || | | | |||| Sbjct 33193 AAACCGACACAGGTAGGTAGGTAGAGAATACCTAGGGGCGCGAGACAA-CTCTCTCTAAG 33135 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||| | ||| |||||||||||| || |||| || | || ||| || || Sbjct 33134 GAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCACAAA--GGGGG 33077 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || || || ||| || ||| |||||||| |||||||||||| || Sbjct 33076 TCGAAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 33031 Score = 84.2 bits (92), Expect = 2e-14 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| || | || ||| | Sbjct 32958 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCACAAA--G 32901 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || || || || ||| || ||| |||||||| |||||||||||| || Sbjct 32900 GGGGTCGAAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 32851 >seq1592 Length=309605 Score = 87.8 bits (96), Expect = 2e-15 Identities = 121/166 (73%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| ||| || ||| || | | | |||| Sbjct 271364 AAACCGACACAGGTAGGTAGGTAGAGAATACCTAGGGGCGCGAGACAA-CTCTCTCTAAG 271306 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||| | ||| |||||||||||| || |||| || | || ||| || || Sbjct 271305 GAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCACAAA--GGGGG 271248 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || || || ||| || ||| |||||||| |||||||||||| || Sbjct 271247 TCGAAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 271202 >seq224 Length=468181 Score = 87.8 bits (96), Expect = 2e-15 Identities = 121/166 (73%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| ||| || ||| || | | | |||| Sbjct 6447 AAACCGACACAGGTAGGTAGGTAGAGAATACCTAGGGGCGCGAGACAA-CTCTCTCTAAG 6389 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||| | ||| |||||||||||| || |||| || | || ||| || || Sbjct 6388 GAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCACAAA--GGGGG 6331 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || || || ||| || ||| |||||||| |||||||||||| || Sbjct 6330 TCGAAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 6285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530797263748