Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq224 93.3 4e-17 seq7442 87.8 2e-15 seq2751 87.8 2e-15 seq1592 87.8 2e-15 >seq224 Length=468181 Score = 93.3 bits (102), Expect = 4e-17 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 |||||||| |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 6332 GGTCGAAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 6273 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 6272 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 6227 >seq7442 Length=2782 Score = 87.8 bits (96), Expect = 2e-15 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| ||||| || ||| | || Sbjct 845 ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGT 786 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| |||||||||||| ||||||||||||||| Sbjct 785 ATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 750 >seq2751 Length=47027 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 |||||||| |||||||| |||||||||| |||||||||| ||| ||||| || Sbjct 32808 GGTCGAAGTGACCAGGCCCGGACGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 32749 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 32748 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 32703 >seq1592 Length=309605 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 |||||||| |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 271249 GGTCGAAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 271190 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | || | ||| |||||||||||| |||||||||||| || Sbjct 271189 AAGACCATGTGTGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 271144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476438507822