Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27]
78,262 sequences; 869,795,571 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq224 93.3 4e-17
seq7442 87.8 2e-15
seq2751 87.8 2e-15
seq1592 87.8 2e-15
>seq224
Length=468181
Score = 93.3 bits (102), Expect = 4e-17
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
|||||||| |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 6332 GGTCGAAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 6273
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 6272 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 6227
>seq7442
Length=2782
Score = 87.8 bits (96), Expect = 2e-15
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116
|||||||| ||||||||||| |||||||||| ||| ||||| || ||| | ||
Sbjct 845 ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGT 786
Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
|| ||| |||||||||||| |||||||||||||||
Sbjct 785 ATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 750
>seq2751
Length=47027
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
|||||||| |||||||| |||||||||| |||||||||| ||| ||||| ||
Sbjct 32808 GGTCGAAGTGACCAGGCCCGGACGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 32749
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 32748 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 32703
>seq1592
Length=309605
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
|||||||| |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 271249 GGTCGAAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 271190
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | || | ||| |||||||||||| |||||||||||| ||
Sbjct 271189 AAGACCATGTGTGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 271144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476438507822
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |