Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27]
78,262 sequences; 869,795,571 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq7442 266 8e-69
seq1592 266 8e-69
seq224 260 3e-67
seq2751 201 3e-49
seq3364 89.7 1e-15
seq52 84.2 6e-14
seq778 78.8 2e-12
>seq7442
Length=2782
Score = 266 bits (294), Expect = 8e-69
Identities = 303/411 (74%), Gaps = 27/411 (7%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||||| || || ||||||| ||| ||| ||||||| ||| ||||||
Sbjct 564 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 623
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 624 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 683
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188
| ||||||||||||||| |||||||||||| || ||| | | | || | |||
Sbjct 684 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 743
Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248
| ||||||||||||||| |||||||||||| ||| |||| | ||| || |||
Sbjct 744 ACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 803
Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308
|| ||| |||||||||| ||||||||||| |||||||| || | |||
Sbjct 804 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCAACC------CC 857
Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368
||| ||| | ||| | ||||||||||||||||||| || ||
Sbjct 858 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 900
Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419
||||| |||||||| ||||| |||| || ||| |||||||||||||
Sbjct 901 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACC 951
>seq1592
Length=309605
Score = 266 bits (294), Expect = 8e-69
Identities = 303/411 (74%), Gaps = 27/411 (7%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||||| || || ||||||| ||| ||| ||||||| ||| ||||||
Sbjct 270958 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 271017
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 271018 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 271077
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188
| ||||||||||||||| |||||||||||| || ||| | ||| || | |||
Sbjct 271078 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCGTCAGGTCACCA 271137
Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248
| || |||||||||||| |||||||||||| ||| | || | ||| || |||
Sbjct 271138 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCACACATGGTCTTACGACTTT 271197
Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308
|| ||| |||||||||| ||||||||||| |||||||| ||||||||
Sbjct 271198 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTTCGACC------CC 271251
Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368
||| ||| ||| | ||||||||||||||||||| || ||
Sbjct 271252 CTTTGTGAG-----------------GGGGCACCCCTTCTCCCGAAGTTACGGGGCTATT 271294
Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419
||||| |||||||| ||||| |||| || ||| |||||||||||||
Sbjct 271295 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACC 271345
>seq224
Length=468181
Score = 260 bits (288), Expect = 3e-67
Identities = 302/411 (73%), Gaps = 27/411 (7%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||||| || || ||||| | ||| ||| ||||||| ||| ||||||
Sbjct 6041 GCATCTTCACAGACATGTCTATTTCCCCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 6100
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6101 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 6160
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188
| ||||||||||||||| |||||||||||| || ||| | | | || | |||
Sbjct 6161 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 6220
Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248
| || |||||||||||| |||||||||||| ||| |||| | ||| || |||
Sbjct 6221 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 6280
Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308
|| ||| |||||||||| ||||||||||| |||||||| ||||||||
Sbjct 6281 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTTCGACC------CC 6334
Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368
||| ||| ||| | ||||||||||||||||||| || ||
Sbjct 6335 CTTTGTGAG-----------------GGGGCACCCCTTCTCCCGAAGTTACGGGGCTATT 6377
Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419
||||| |||||||| ||||| |||| || ||| |||||||||||||
Sbjct 6378 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACC 6428
>seq2751
Length=47027
Score = 201 bits (222), Expect = 3e-49
Identities = 197/252 (78%), Gaps = 4/252 (2%)
Strand=Plus/Plus
Query 53 GAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 112
||||||| ||| ||||||||||| ||||||| |||||||| |||||||||||||||||
Sbjct 32557 GAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAAATTACCCGACAAGGAATT 32616
Query 113 TCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT 172
||||||||||||||||||||| |||| |||||||||| | ||||||||| || |||
Sbjct 32617 TCGCTACCTTAGGACCGTTATAGTTATGGCCGCCGTTCAGTGGGGCTTCGGTCGCCGGCT 32676
Query 173 TCGC-GTTAGC---TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCT 228
| | || | | | ||| | || |||||||||||| |||||||||||| |||
Sbjct 32677 CCCCTGTCATCAAGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCC 32736
Query 229 ATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTG 288
|||| | ||| || ||||| ||| |||||||||| |||||||||| ||||||
Sbjct 32737 ATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGTCCGGGCCTG 32796
Query 289 GTATCTTCGACC 300
|| ||||||||
Sbjct 32797 GTCACTTCGACC 32808
Score = 82.4 bits (90), Expect = 2e-13
Identities = 73/92 (79%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||||| || || ||||||| ||| ||| ||||||| ||| ||||||
Sbjct 32452 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 32511
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGAC 104
||||| ||||||| |||||||| |||||| ||
Sbjct 32512 ACGCCTTTCGTGCGGGTCGGAAATTACCCNAC 32543
Score = 78.8 bits (86), Expect = 2e-12
Identities = 67/83 (81%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| || ||||||| |||||||| ||||| |||
Sbjct 32912 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 32971
Query 397 CAAGCGCCTTGGTATTCTCTACC 419
| || ||| |||||||||||||
Sbjct 32972 CGCGCCCCTAGGTATTCTCTACC 32994
Score = 78.8 bits (86), Expect = 2e-12
Identities = 67/83 (81%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| || ||||||| |||||||| ||||| |||
Sbjct 33092 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 33151
Query 397 CAAGCGCCTTGGTATTCTCTACC 419
| || ||| |||||||||||||
Sbjct 33152 CGCGCCCCTAGGTATTCTCTACC 33174
>seq3364
Length=27722
Score = 89.7 bits (98), Expect = 1e-15
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 52 GGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 111
|||||||||| || ||||||| |||||||||||||||| ||||| |||||||||||
Sbjct 17393 GGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAAT 17334
Query 112 TTCGCTACCTTA 123
||||||||||||
Sbjct 17333 TTCGCTACCTTA 17322
>seq52
Length=1114353
Score = 84.2 bits (92), Expect = 6e-14
Identities = 78/96 (81%), Gaps = 6/96 (6%)
Strand=Plus/Minus
Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130
||||||| ||| ||| |||| ||||||||| ||||| |||||| |||||||||||||||
Sbjct 394272 TTACGCCTTTCATGCGGGTCAGAACTTACC-GACAACGAATTTTTCTACCTTAGGACCGT 394214
Query 131 TATTGTTACGGCCGCCGTTTACCGGGG-CTTCGATC 165
||| |||| || |||| ||||| ||||||||
Sbjct 394213 TATAGTTA----CGTTGTTTGTCGGGGCCTTCGATC 394182
>seq778
Length=731603
Score = 78.8 bits (86), Expect = 2e-12
Identities = 67/83 (81%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| || ||||||| |||||||| ||||| |||
Sbjct 376603 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGATAGAGTTGTCT 376662
Query 397 CAAGCGCCTTGGTATTCTCTACC 419
| || ||| |||||||||||||
Sbjct 376663 CGCGCCCCTAGGTATTCTCTACC 376685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1259813272704
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