Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq7442 338 1e-90 seq1592 327 2e-87 seq224 327 2e-87 seq2751 251 2e-64 seq52 102 2e-19 seq1637 75.2 2e-11 seq1180 73.4 8e-11 >seq7442 Length=2782 Score = 338 bits (374), Expect = 1e-90 Identities = 289/353 (82%), Gaps = 8/353 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 564 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 623 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 624 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 683 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 684 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 743 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||||||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 744 ACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 803 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTG---CGGCCTGTCA 299 || || ||||||||||||||||||||||||| |||||| || ||| | ||| | Sbjct 804 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCAACCCCCTTTGT 863 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 864 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 915 >seq1592 Length=309605 Score = 327 bits (362), Expect = 2e-87 Identities = 287/355 (81%), Gaps = 12/355 (3%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 270958 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 271017 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 271018 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 271077 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 271078 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCGTCAGGTCACCA 271137 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || | |||| ||||| |||||| Sbjct 271138 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCACACATGGTCTTACGACTTT 271197 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-----TGT 297 || || ||||||||||||||||||||||||| |||||| || || || || ||| Sbjct 271198 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTTCGACCCCCTTTGT 271257 Query 298 CATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 271258 GAGGG---GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 271309 >seq224 Length=468181 Score = 327 bits (362), Expect = 2e-87 Identities = 287/355 (81%), Gaps = 12/355 (3%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||| ||||| || | ||||||||||||| |||||| Sbjct 6041 GCATCTTCACAGACATGTCTATTTCCCCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 6100 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6101 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 6160 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 6161 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 6220 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 6221 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 6280 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-----TGT 297 || || ||||||||||||||||||||||||| |||||| || || || || ||| Sbjct 6281 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTTCGACCCCCTTTGT 6340 Query 298 CATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 6341 GAGGG---GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 6392 >seq2751 Length=47027 Score = 251 bits (278), Expect = 2e-64 Identities = 208/252 (83%), Gaps = 4/252 (2%) Strand=Plus/Plus Query 47 GAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATT 106 ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 32557 GAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAAATTACCCGACAAGGAATT 32616 Query 107 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCT 166 |||||||||||||||||||||||||| |||||||||| | |||||||| || | ||| Sbjct 32617 TCGCTACCTTAGGACCGTTATAGTTATGGCCGCCGTTCAGTGGGGCTTCGGTCGCCGGCT 32676 Query 167 TCGAT-TGCTC---TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCT 222 | | | || | || | |||| ||||||| |||| |||||||||||||| || Sbjct 32677 CCCCTGTCATCAAGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCC 32736 Query 223 ATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTA 282 |||||| ||||| |||||| || || |||||||||||||||||||||||| |||||| Sbjct 32737 ATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGTCCGGGCCTG 32796 Query 283 TTCTCTGCGGCC 294 || || || || Sbjct 32797 GTCACTTCGACC 32808 Score = 125 bits (138), Expect = 2e-26 Identities = 111/138 (80%), Gaps = 8/138 (6%) Strand=Plus/Plus Query 220 CCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGC 279 || |||||| ||||| |||||| || || ||||||||||||||||||||||||| |||| Sbjct 32824 CCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGC 32883 Query 280 CTATTCTCTGCGGCC-----TGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTC 334 || || || || || ||| | | ||||||||||||||| ||||||||||| Sbjct 32884 CTGGTCACTTCGACCCCCTTTGTGAGGG---GGCACCCCTTCTCCCGAAGTTACGGGGCT 32940 Query 335 ATTTTGCCGAGTTCCTTA 352 |||||||||||||||||| Sbjct 32941 ATTTTGCCGAGTTCCTTA 32958 Score = 125 bits (138), Expect = 2e-26 Identities = 111/138 (80%), Gaps = 8/138 (6%) Strand=Plus/Plus Query 220 CCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGC 279 || |||||| ||||| |||||| || || ||||||||||||||||||||||||| |||| Sbjct 33004 CCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGC 33063 Query 280 CTATTCTCTGCGGCC-----TGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTC 334 || || || || || ||| | | ||||||||||||||| ||||||||||| Sbjct 33064 CTGGTCACTTCGACCCCCTTTGTGAGGG---GGCACCCCTTCTCCCGAAGTTACGGGGCT 33120 Query 335 ATTTTGCCGAGTTCCTTA 352 |||||||||||||||||| Sbjct 33121 ATTTTGCCGAGTTCCTTA 33138 Score = 100 bits (110), Expect = 6e-19 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 32452 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 32511 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGAC 98 |||||||||||||||||||||| |||||| || Sbjct 32512 ACGCCTTTCGTGCGGGTCGGAAATTACCCNAC 32543 >seq52 Length=1114353 Score = 102 bits (112), Expect = 2e-19 Identities = 76/88 (86%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 47 GAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATT 106 || ||||| | || | | ||||||||||| |||||||| ||||||||| ||||| ||||| Sbjct 394290 GAAACAGTTCTCACAGCTTTACGCCTTTCATGCGGGTCAGAACTTACC-GACAACGAATT 394232 Query 107 TCGCTACCTTAGGACCGTTATAGTTACG 134 | ||||||||||||||||||||||||| Sbjct 394231 TTTCTACCTTAGGACCGTTATAGTTACG 394204 >seq1637 Length=276307 Score = 75.2 bits (82), Expect = 2e-11 Identities = 44/46 (96%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 307 GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||||||||||| |||||||||||||||||||||||||||| || Sbjct 228241 GCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCGTA 228196 >seq1180 Length=177182 Score = 73.4 bits (80), Expect = 8e-11 Identities = 61/75 (81%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||| ||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 135754 GCATTTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 135695 Query 67 ACGCCTTTCGTGCGG 81 ||||||||||||||| Sbjct 135694 ACGCCTTTCGTGCGG 135680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1061568544512