Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27]
78,262 sequences; 869,795,571 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq31236 475 1e-131
seq915 470 4e-130
seq22854 264 3e-68
seq2378 210 7e-52
seq22649 201 3e-49
seq973 123 7e-26
seq434 102 2e-19
seq967 87.8 5e-15
seq1 86.0 2e-14
seq39665 77.0 1e-11
>seq31236
Length=1467
Score = 475 bits (526), Expect = 1e-131
Identities = 406/497 (82%), Gaps = 3/497 (1%)
Strand=Plus/Minus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||| | |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 736 TACGTTCGCACGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 677
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||||| |||| |||||||||||||||| |||||||| | || ||||
Sbjct 676 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 617
Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180
| || | ||||| | || |||||| || | ||||||| ||||||| |||||||||
Sbjct 616 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 559
Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240
|||||| ||| || ||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 558 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 499
Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300
|| | || |||| || || || | |||||||||||| || ||||||||||||| |||
Sbjct 498 CAACGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 439
Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360
|||||||| ||||||||||||||||| ||||| |||||||||||||||||| | ||
Sbjct 438 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 379
Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420
|||||| |||| |||||||| ||| || |||| ||| || ||||||||||||||
Sbjct 378 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACCCCAAAAACCCGTCCTCAGTTCGGATTG 319
Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479
|| |||||||||| || ||||||| ||||||||||||||||| | |||| ||| |
Sbjct 318 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 259
Query 480 CGGTGAATACGTTCCCG 496
|||||||| ||||||||
Sbjct 258 CGGTGAATTCGTTCCCG 242
>seq915
Length=368017
Score = 470 bits (520), Expect = 4e-130
Identities = 395/481 (82%), Gaps = 3/481 (1%)
Strand=Plus/Plus
Query 17 AAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAG 76
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 287814 AAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATG 287873
Query 77 CAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTC 136
||| |||||||||||||||| |||||||| | || ||||| || | ||||| |
Sbjct 287874 CAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTG 287933
Query 137 CCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATG 196
|| |||||| || | ||||||| ||||||| ||||||||||||||| ||| || ||
Sbjct 287934 CC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTG 287991
Query 197 TTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGC 256
||||||||||||||||||||||||||||||| | |||||||||| | || |||| ||
Sbjct 287992 TTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCAACGTTGAGTTTGGA 288051
Query 257 ACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCAT 316
|| || | |||||||||||| || ||||||||||||| ||| |||||||| |||||||
Sbjct 288052 ACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCAT 288111
Query 317 GCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACC 376
|||||||||| ||||| |||||||||||||||||| | |||||||| |||| ||
Sbjct 288112 GCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGCGATCCC 288171
Query 377 GCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGAC 436
|||||| ||| || |||| ||| || |||||||||||||| || |||||||||| |
Sbjct 288172 GCGAGGGTGAGCTAACCCCAAAAACCCGTCCTCAGTTCGGATTGCAGGCTGCAACTCGCC 288231
Query 437 TATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTACGGTGAATACGTTCCC 495
| ||||||| ||||||||||||||||| | |||| ||| | |||||||| |||||||
Sbjct 288232 TGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATTCGTTCCC 288291
Query 496 G 496
|
Sbjct 288292 G 288292
>seq22854
Length=1460
Score = 264 bits (292), Expect = 3e-68
Identities = 226/275 (82%), Gaps = 3/275 (1%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1189 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 1248
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||||| |||| |||||||||||||||| |||||||| | || ||||
Sbjct 1249 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 1308
Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180
| || | ||||| | ||||| ||| || | ||||||| ||||||| |||||||||
Sbjct 1309 TTGAAAGAGAGGGGT-GCCTTC-GGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 1366
Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240
|||||| ||| || ||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 1367 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 1426
Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGG 275
|| | || |||| || || || | |||||||||
Sbjct 1427 CA-CGTTGAGTTTGGAACCCTGAACAGACTGCCGG 1460
>seq2378
Length=68098
Score = 210 bits (232), Expect = 7e-52
Identities = 189/236 (80%), Gaps = 1/236 (0%)
Strand=Plus/Plus
Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326
||||||| |||| | || ||||||||||||||| |||||||| || |||| ||||||||
Sbjct 10186 GACTGCCAGTGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 10245
Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAA 386
||||| ||||||||||||||||||| | ||||| ||| ||| | | | ||| |
Sbjct 10246 GGCTGGGCCACACACGTGCTACAATGGAAATTACAATGGGAAGCAAGGCTGTAAGGCGGA 10305
Query 387 GCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGC 446
|||||| || |||| | ||||||||||||||| |||||||||||| | ||||||
Sbjct 10306 GCAAAT-CCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGAGAACATGAAGT 10364
Query 447 TGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCCCT 502
|||||||||||||||||| ||||||||||| ||||||||| || |||| ||||
Sbjct 10365 TGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCT 10420
Score = 167 bits (184), Expect = 7e-39
Identities = 180/234 (77%), Gaps = 17/234 (7%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 9581 TACGGTCGCAAGACCGAAACTCAAAGGAATTGACGGGGGCCTGCACAAGCGGTGGAGCAT 9640
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||||| ||||||| | |||||||||| ||||||| | ||| |
Sbjct 9641 GTGGTTTAATTCGATACAACGCGCAAAACCTTACCAGCCCTTGACA---TATGA----AC 9693
Query 121 TAGAGATAGAGGTTTCCCCTTCGG---GGGACAGA-GT---GACAGGTGATGCATGGTTG 173
||| | | | ||| ||| || || || || ||||||| ||||||| ||
Sbjct 9694 AAGA---AAACCTGTCCTTAACGGGATGGTACTGACGTTCATACAGGTGCTGCATGGCTG 9750
Query 174 TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227
||||||||||||||||||||||||| ||| |||||| |||||||| || |||
Sbjct 9751 TCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAGCGAAAACCT 9804
>seq22649
Length=1522
Score = 201 bits (222), Expect = 3e-49
Identities = 187/236 (79%), Gaps = 1/236 (0%)
Strand=Plus/Plus
Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326
||||||| |||| | || ||||||||||||||| |||||||| || |||| ||||||||
Sbjct 510 GACTGCCAGTGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 569
Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAA 386
||||| |||||||||||||||||| | ||||| ||| ||| | | | ||| |
Sbjct 570 GGCTGGGCCACACACGTGCTACAATGGCAATTACAATGGGAAGCAAGGCTGTAAGGCGGA 629
Query 387 GCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGC 446
|| ||||| || ||| ||||||||||||||| |||||||||||| | ||||||
Sbjct 630 GCGAATCCGGAAAGATTGC-CTCAGTTCGGATTGTTCTCTGCAACTCGAGAACATGAAGT 688
Query 447 TGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCCCT 502
|||||||||||||||||| ||||||||||| ||||||||| || |||| ||||
Sbjct 689 TGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCT 744
Score = 95.1 bits (104), Expect = 4e-17
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215
||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||| |||
Sbjct 57 ACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAAC 116
Query 216 GAGCGCAACCCT 227
||||| ||||||
Sbjct 117 GAGCGAAACCCT 128
>seq973
Length=298863
Score = 123 bits (136), Expect = 7e-26
Identities = 91/106 (86%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215
||||||| ||||||| ||||||||||||||| ||| || |||||||||||||||||||||
Sbjct 122768 ACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAAC 122827
Query 216 GAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCT 261
|||||||||||| | |||||||||| | || |||| || || ||
Sbjct 122828 GAGCGCAACCCTCGTGTTTAGTTGCCAACGTTGAGTTTGGAACCCT 122873
>seq434
Length=224846
Score = 102 bits (112), Expect = 2e-19
Identities = 76/89 (85%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 8 GCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTT 67
|| || | ||||||||||||||||||||||| | ||| ||| |||||||||||||||||
Sbjct 219875 GCCAGTTCGAAACTCAAAGGAATTGACGGGGGCTTGCAAAAGTGGTGGAGCATGTGGTTT 219934
Query 68 AATTCGAAGCAACGCGAAGAACCTTACCA 96
||||| | ||||||| | ||||||||||
Sbjct 219935 AATTCAATACAACGCGCAAAACCTTACCA 219963
>seq967
Length=318262
Score = 87.8 bits (96), Expect = 5e-15
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 31 TGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACC 90
|| ||||| || |||||||||||||||||||||||||||||||| ||||||| | ||||
Sbjct 41307 TGGCGGGGGCCTGCACAAGCGGTGGAGCATGTGGTTTAATTCGATACAACGCGCAAAACC 41366
Query 91 TTACCA 96
||||||
Sbjct 41367 TTACCA 41372
>seq1
Length=3292865
Score = 86.0 bits (94), Expect = 2e-14
Identities = 83/106 (78%), Gaps = 2/106 (2%)
Strand=Plus/Minus
Query 157 CAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACG 216
|| ||| ||||||| ||| | | |||||| ||| || |||||||||||||||||||| |
Sbjct 2988017 CAAGTGGTGCATGGCTGTTG--ATCTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAATG 2987960
Query 217 AGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTA 262
||||||||||| | | |||||||| | || | || || || |||
Sbjct 2987959 AGCGCAACCCTCGTGTTGAGTTGCCAACGTTGACTTTGGAACCCTA 2987914
>seq39665
Length=999
Score = 77.0 bits (84), Expect = 1e-11
Identities = 80/103 (78%), Gaps = 3/103 (3%)
Strand=Plus/Minus
Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGG--GGACCCGCACAAGCGGTGGAGCATGTGG 64
||||||| ||||||| |||||||||||||| || | | |||||| ||||||| || ||
Sbjct 916 CGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCAC-CACAAGGAGTGGAGCCTGCGG 858
Query 65 TTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107
|||||| || |||| || ||| ||||||| || |||||
Sbjct 857 CTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACAT 815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1502822939520
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