Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27]
78,262 sequences; 869,795,571 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq22854 226 6e-57
seq255 226 6e-57
seq31236 217 3e-54
seq780 205 2e-50
seq2378 199 8e-49
seq1488 197 3e-48
seq248 197 3e-48
seq317 190 4e-46
seq973 183 7e-44
seq3422 165 2e-38
seq1257 165 2e-38
seq1805 140 7e-31
seq1111 109 1e-21
seq982 104 5e-20
seq157 86.0 1e-14
>seq22854
Length=1460
Score = 226 bits (250), Expect = 6e-57
Identities = 240/310 (77%), Gaps = 20/310 (6%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||||||||||||||||| || ||||||||||||||||||
Sbjct 726 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 668
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| |
Sbjct 667 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 608
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207
|| |||| |||||||||| ||| ||||||||||||||||||||||| ||| | || | |
Sbjct 607 ACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCT 548
Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267
|| || ||| || ||| |||| | | | | || | ||||||||
Sbjct 547 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTTCTCAG-CCTACGGGGTATTAG 502
Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325
| |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||||
Sbjct 501 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 444
Query 326 GTCCGCCGCT 335
||||||| ||
Sbjct 443 GTCCGCCACT 434
>seq255
Length=403878
Score = 226 bits (250), Expect = 6e-57
Identities = 240/310 (77%), Gaps = 20/310 (6%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||||||||||||||||| || ||||||||||||||||||
Sbjct 389077 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 389135
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| |
Sbjct 389136 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 389195
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207
|| |||| |||||||||| ||| ||||||||||||||||||||||| ||| | || | |
Sbjct 389196 ACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCT 389255
Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267
|| || ||| || ||| |||| | | | | || | ||||||||
Sbjct 389256 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTTCTCAG-CCTACGGGGTATTAG 389301
Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325
| |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||||
Sbjct 389302 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 389359
Query 326 GTCCGCCGCT 335
||||||| ||
Sbjct 389360 GTCCGCCACT 389369
>seq31236
Length=1467
Score = 217 bits (240), Expect = 3e-54
Identities = 151/170 (89%), Gaps = 1/170 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||||||||||||||||| || ||||||||||||||||||
Sbjct 1199 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 1257
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| |
Sbjct 1258 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 1317
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
|| |||| |||||||||| ||| ||| ||||||||||||||||||| |||
Sbjct 1318 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 1367
>seq780
Length=650642
Score = 205 bits (226), Expect = 2e-50
Identities = 148/170 (87%), Gaps = 1/170 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|| ||| ||||| || |||||||||||||||||| || ||| ||||||||| ||||
Sbjct 273655 CATGCGACATTG-CTCTGTCAGGCTTTCGCCCATTGCGGAAAATTTCCCACTGCTACCTC 273713
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| |
Sbjct 273714 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 273773
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
|| |||| |||||||||| ||| ||||||||||||||||||||||| |||
Sbjct 273774 ACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGAC 273823
>seq2378
Length=68098
Score = 199 bits (220), Expect = 8e-49
Identities = 167/202 (83%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76
||||||| ||| |||||| |||| ||||||| |||||||||||||||||||| ||||||
Sbjct 9133 CCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCC 9076
Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136
|||||||||| ||||| |||||| || |||||||||||| || ||||| ||||||||||
Sbjct 9075 CACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCG 9016
Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCG 196
||||||| || | ||| | | |||||| |||| |||||| |||||||| ||||| |
Sbjct 9015 AAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACT 8956
Query 197 ACCTAGGCTCATCTGATAGCGC 218
|| ||||||||| | |||||
Sbjct 8955 ACGCAGGCTCATCAAACAGCGC 8934
>seq1488
Length=468551
Score = 197 bits (218), Expect = 3e-48
Identities = 235/312 (75%), Gaps = 24/312 (8%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
||||||||||| || ||||||||||||||||| || ||||||||||||||||||
Sbjct 242065 CACGCGGCATTT-CTCCGTCAGGCTTTCGCCCATTTCGGAAAATTCCCCACTGCTGCCTC 242007
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
| |||| ||||||| |||||||||||| |||||||| ||||||||| ||| |||||| |
Sbjct 242006 CTGTAGAAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGTTGATCATCCCCTCGGACCAGCT 241947
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCAT 208
|| |||| |||||||||| ||| ||||||||||||||||||||||| ||| || | |
Sbjct 241946 ACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCT 241887
Query 209 CTGATAGCGCAAGGCCCGAAGGTCC-CCTGCT--TTCTCCCGTAGGACGTATGCGGTATT 265
| | || | || ||| ||| | ||||| || | || | ||||||
Sbjct 241886 C--------CCCGGGCGGA--TTCCTCCTTTTGCTTCTC----AG--CCTACGGGGTATT 241843
Query 266 AGCGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCAC 323
||| |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||
Sbjct 241842 AGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCAC 241785
Query 324 CCGTCCGCCGCT 335
||||||||| ||
Sbjct 241784 CCGTCCGCCACT 241773
>seq248
Length=394853
Score = 197 bits (218), Expect = 3e-48
Identities = 149/174 (86%), Gaps = 5/174 (3%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || ||||||||||||||||||| | || |||||||||||||||
Sbjct 377776 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGTGGTAAATACCCCACTGCTGCCTC 377834
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| |||||||| || ||||||||||| ||| || |
Sbjct 377835 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTAATCATCCTCTCGGACTAGCT 377894
Query 149 ACGGATCGTCGCCTTGGT----GAGCCATTACCTCACCAACTAGCTAATCCGAC 198
|| |||| |||||||||| | || ||||||||||||||||||||||| |||
Sbjct 377895 ACTGATCATCGCCTTGGTAAGCGCGCTATTACCTCACCAACTAGCTAATCAGAC 377948
>seq317
Length=322073
Score = 190 bits (210), Expect = 4e-46
Identities = 145/170 (85%), Gaps = 1/170 (1%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||| ||||| || |||||||||||||||||| || ||||||||||| ||||||
Sbjct 131016 CACGCGACATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGATGCCTC 130958
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|| ||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| |
Sbjct 130957 CCATAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 130898
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
| |||| | |||||||| || ||||||| ||||||||||||||| |||
Sbjct 130897 ATTGATCATGGCCTTGGTAAGGTATTACCTTACCAACTAGCTAATCAGAC 130848
>seq973
Length=298863
Score = 183 bits (202), Expect = 7e-44
Identities = 126/141 (89%), Gaps = 1/141 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| | | ||||||||||||||||||| || ||||||||||||||||||
Sbjct 119648 CACGCGGCATTGCTTCG-TCAGGCTTTCGCCCATTGTGGAAAATTCCCCACTGCTGCCTC 119706
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| |
Sbjct 119707 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 119766
Query 149 ACGGATCGTCGCCTTGGTGAG 169
|| |||| |||||||||| ||
Sbjct 119767 ACTGATCATCGCCTTGGTAAG 119787
>seq3422
Length=26285
Score = 165 bits (182), Expect = 2e-38
Identities = 127/151 (84%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 41 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 100
|||||||| |||||||||||||||||||| |||||||||||||||| ||| | ||||||
Sbjct 787 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCATGGGAGTCC 846
Query 101 GGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGC 160
|| |||||||||||| || ||||| |||||||||| ||||||| || | ||| | |
Sbjct 847 GGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 906
Query 161 CTTGGTGAGCCATTACCTCACCAACTAGCTA 191
|||||| |||| |||||| |||||||| |||
Sbjct 907 CTTGGTCAGCCTTTACCTGACCAACTACCTA 937
>seq1257
Length=141525
Score = 165 bits (182), Expect = 2e-38
Identities = 127/151 (84%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 41 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 100
|||||||| |||||||||||||||||||| |||||||||||||||| ||| | ||||||
Sbjct 119431 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCATGGGAGTCC 119372
Query 101 GGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGC 160
|| |||||||||||| || ||||| |||||||||| ||||||| || | ||| | |
Sbjct 119371 GGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 119312
Query 161 CTTGGTGAGCCATTACCTCACCAACTAGCTA 191
|||||| |||| |||||| |||||||| |||
Sbjct 119311 CTTGGTCAGCCTTTACCTGACCAACTACCTA 119281
>seq1805
Length=178059
Score = 140 bits (154), Expect = 7e-31
Identities = 97/109 (89%), Gaps = 1/109 (1%)
Strand=Plus/Minus
Query 34 GGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTA 93
||||||| || |||||||||||||||||| || |||||||||||||||||||||||
Sbjct 54707 GGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTA 54649
Query 94 GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGA 142
||||||||| |||||||||||| |||||||| |||||||||||||| ||
Sbjct 54648 GGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGA 54600
>seq1111
Length=227953
Score = 109 bits (120), Expect = 1e-21
Identities = 66/70 (94%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 68 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACT 127
|| |||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||
Sbjct 47791 AAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCT 47850
Query 128 GATCATCCTC 137
||||||||||
Sbjct 47851 GATCATCCTC 47860
>seq982
Length=285417
Score = 104 bits (114), Expect = 5e-20
Identities = 86/105 (82%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 74 CCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCAT 133
||||||||||||| ||||| |||||| || |||||||||||| || |||| ||||||||
Sbjct 2641 CCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCGTTGTGGCTGATCAT 2582
Query 134 CCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178
|| ||||||| || | ||| | | |||||| |||||||||||
Sbjct 2581 CCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCATTACCT 2537
>seq157
Length=663026
Score = 86.0 bits (94), Expect = 1e-14
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 41 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAG 97
|||||||| |||||||||||||||||||| |||||||||||||||| ||||| ||||
Sbjct 463339 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAG 463283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071161031360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |