Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq22854 226 6e-57 seq255 226 6e-57 seq31236 217 3e-54 seq780 205 2e-50 seq2378 199 8e-49 seq1488 197 3e-48 seq248 197 3e-48 seq317 190 4e-46 seq973 183 7e-44 seq3422 165 2e-38 seq1257 165 2e-38 seq1805 140 7e-31 seq1111 109 1e-21 seq982 104 5e-20 seq157 86.0 1e-14 >seq22854 Length=1460 Score = 226 bits (250), Expect = 6e-57 Identities = 240/310 (77%), Gaps = 20/310 (6%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 726 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 668 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 667 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 608 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||||||||||||||||||||||| ||| | || | | Sbjct 607 ACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCT 548 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | || | |||||||| Sbjct 547 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTTCTCAG-CCTACGGGGTATTAG 502 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| ||||| ||| || || |||||||||| Sbjct 501 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 444 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 443 GTCCGCCACT 434 >seq255 Length=403878 Score = 226 bits (250), Expect = 6e-57 Identities = 240/310 (77%), Gaps = 20/310 (6%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 389077 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 389135 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 389136 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 389195 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||||||||||||||||||||||| ||| | || | | Sbjct 389196 ACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCT 389255 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | || | |||||||| Sbjct 389256 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTTCTCAG-CCTACGGGGTATTAG 389301 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| ||||| ||| || || |||||||||| Sbjct 389302 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 389359 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 389360 GTCCGCCACT 389369 >seq31236 Length=1467 Score = 217 bits (240), Expect = 3e-54 Identities = 151/170 (89%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 1199 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 1257 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 1258 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 1317 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| Sbjct 1318 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 1367 >seq780 Length=650642 Score = 205 bits (226), Expect = 2e-50 Identities = 148/170 (87%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 || ||| ||||| || |||||||||||||||||| || ||| ||||||||| |||| Sbjct 273655 CATGCGACATTG-CTCTGTCAGGCTTTCGCCCATTGCGGAAAATTTCCCACTGCTACCTC 273713 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 273714 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 273773 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| ||| ||||||||||||||||||||||| ||| Sbjct 273774 ACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGAC 273823 >seq2378 Length=68098 Score = 199 bits (220), Expect = 8e-49 Identities = 167/202 (83%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| |||||| |||| ||||||| |||||||||||||||||||| |||||| Sbjct 9133 CCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCC 9076 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 |||||||||| ||||| |||||| || |||||||||||| || ||||| |||||||||| Sbjct 9075 CACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCG 9016 Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCG 196 ||||||| || | ||| | | |||||| |||| |||||| |||||||| ||||| | Sbjct 9015 AAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACT 8956 Query 197 ACCTAGGCTCATCTGATAGCGC 218 || ||||||||| | ||||| Sbjct 8955 ACGCAGGCTCATCAAACAGCGC 8934 >seq1488 Length=468551 Score = 197 bits (218), Expect = 3e-48 Identities = 235/312 (75%), Gaps = 24/312 (8%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 ||||||||||| || ||||||||||||||||| || |||||||||||||||||| Sbjct 242065 CACGCGGCATTT-CTCCGTCAGGCTTTCGCCCATTTCGGAAAATTCCCCACTGCTGCCTC 242007 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 | |||| ||||||| |||||||||||| |||||||| ||||||||| ||| |||||| | Sbjct 242006 CTGTAGAAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGTTGATCATCCCCTCGGACCAGCT 241947 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCAT 208 || |||| |||||||||| ||| ||||||||||||||||||||||| ||| || | | Sbjct 241946 ACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCT 241887 Query 209 CTGATAGCGCAAGGCCCGAAGGTCC-CCTGCT--TTCTCCCGTAGGACGTATGCGGTATT 265 | | || | || ||| ||| | ||||| || | || | |||||| Sbjct 241886 C--------CCCGGGCGGA--TTCCTCCTTTTGCTTCTC----AG--CCTACGGGGTATT 241843 Query 266 AGCGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCAC 323 ||| |||||||| ||| | ||| || ||| ||||| ||| || || |||||||| Sbjct 241842 AGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCAC 241785 Query 324 CCGTCCGCCGCT 335 ||||||||| || Sbjct 241784 CCGTCCGCCACT 241773 >seq248 Length=394853 Score = 197 bits (218), Expect = 3e-48 Identities = 149/174 (86%), Gaps = 5/174 (3%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || ||||||||||||||||||| | || ||||||||||||||| Sbjct 377776 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGTGGTAAATACCCCACTGCTGCCTC 377834 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| || ||||||||||| ||| || | Sbjct 377835 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTAATCATCCTCTCGGACTAGCT 377894 Query 149 ACGGATCGTCGCCTTGGT----GAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| | || ||||||||||||||||||||||| ||| Sbjct 377895 ACTGATCATCGCCTTGGTAAGCGCGCTATTACCTCACCAACTAGCTAATCAGAC 377948 >seq317 Length=322073 Score = 190 bits (210), Expect = 4e-46 Identities = 145/170 (85%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||| ||||| || |||||||||||||||||| || ||||||||||| |||||| Sbjct 131016 CACGCGACATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGATGCCTC 130958 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 || ||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 130957 CCATAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 130898 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 | |||| | |||||||| || ||||||| ||||||||||||||| ||| Sbjct 130897 ATTGATCATGGCCTTGGTAAGGTATTACCTTACCAACTAGCTAATCAGAC 130848 >seq973 Length=298863 Score = 183 bits (202), Expect = 7e-44 Identities = 126/141 (89%), Gaps = 1/141 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| | | ||||||||||||||||||| || |||||||||||||||||| Sbjct 119648 CACGCGGCATTGCTTCG-TCAGGCTTTCGCCCATTGTGGAAAATTCCCCACTGCTGCCTC 119706 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 119707 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 119766 Query 149 ACGGATCGTCGCCTTGGTGAG 169 || |||| |||||||||| || Sbjct 119767 ACTGATCATCGCCTTGGTAAG 119787 >seq3422 Length=26285 Score = 165 bits (182), Expect = 2e-38 Identities = 127/151 (84%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 41 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 100 |||||||| |||||||||||||||||||| |||||||||||||||| ||| | |||||| Sbjct 787 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCATGGGAGTCC 846 Query 101 GGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGC 160 || |||||||||||| || ||||| |||||||||| ||||||| || | ||| | | Sbjct 847 GGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 906 Query 161 CTTGGTGAGCCATTACCTCACCAACTAGCTA 191 |||||| |||| |||||| |||||||| ||| Sbjct 907 CTTGGTCAGCCTTTACCTGACCAACTACCTA 937 >seq1257 Length=141525 Score = 165 bits (182), Expect = 2e-38 Identities = 127/151 (84%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 41 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 100 |||||||| |||||||||||||||||||| |||||||||||||||| ||| | |||||| Sbjct 119431 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCATGGGAGTCC 119372 Query 101 GGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGC 160 || |||||||||||| || ||||| |||||||||| ||||||| || | ||| | | Sbjct 119371 GGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 119312 Query 161 CTTGGTGAGCCATTACCTCACCAACTAGCTA 191 |||||| |||| |||||| |||||||| ||| Sbjct 119311 CTTGGTCAGCCTTTACCTGACCAACTACCTA 119281 >seq1805 Length=178059 Score = 140 bits (154), Expect = 7e-31 Identities = 97/109 (89%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 34 GGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTA 93 ||||||| || |||||||||||||||||| || ||||||||||||||||||||||| Sbjct 54707 GGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTA 54649 Query 94 GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGA 142 ||||||||| |||||||||||| |||||||| |||||||||||||| || Sbjct 54648 GGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGA 54600 >seq1111 Length=227953 Score = 109 bits (120), Expect = 1e-21 Identities = 66/70 (94%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 68 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACT 127 || |||||||||||||||||||||||||||||||| |||||||||||| |||||||| || Sbjct 47791 AAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCT 47850 Query 128 GATCATCCTC 137 |||||||||| Sbjct 47851 GATCATCCTC 47860 >seq982 Length=285417 Score = 104 bits (114), Expect = 5e-20 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 74 CCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCAT 133 ||||||||||||| ||||| |||||| || |||||||||||| || |||| |||||||| Sbjct 2641 CCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCGTTGTGGCTGATCAT 2582 Query 134 CCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 || ||||||| || | ||| | | |||||| ||||||||||| Sbjct 2581 CCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCATTACCT 2537 >seq157 Length=663026 Score = 86.0 bits (94), Expect = 1e-14 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 41 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAG 97 |||||||| |||||||||||||||||||| |||||||||||||||| ||||| |||| Sbjct 463339 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAG 463283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071161031360