Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27]
78,262 sequences; 869,795,571 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq7442 161 4e-37
seq1592 159 1e-36
seq2751 158 4e-36
seq1545 143 1e-31
seq763 122 3e-25
seq43 116 1e-23
seq33 111 6e-22
seq973 100 1e-18
seq113 89.7 2e-15
seq3519 86.0 2e-14
seq80 78.8 3e-12
>seq7442
Length=2782
Score = 161 bits (178), Expect = 4e-37
Identities = 213/289 (74%), Gaps = 16/289 (6%)
Strand=Plus/Plus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 1764 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 1823
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| ||
Sbjct 1824 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 1883
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| |||| |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 1884 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 1943
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370
|| | ||||||| |||||||||||||||||||| || || ||||
Sbjct 1944 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 1996
Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGC 418
|| || ||| | | | |||| |||||||||||||| ||||||||
Sbjct 1997 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGC 2043
Score = 143 bits (158), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 11/209 (5%)
Strand=Plus/Plus
Query 391 TCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTC 450
|||| |||||||||||||| |||||||| |||| ||| || || | | |||
Sbjct 2151 TCGCCGGCTCATTCTTCAACAGGCACGCGGTCAG--GGT--CT----GG---TCCCCCTC 2199
Query 451 CGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTC 510
| || | ||| || | ||||||| || ||||||||||||||| ||||| ||||||
Sbjct 2200 CCACTGCTTGAGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTC 2259
Query 511 ACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGG 570
||| ||||||||||||||| | |||||||||||||| |||||||||||| ||| ||
Sbjct 2260 ACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGG 2319
Query 571 TGGTCCCGCCAGATTCACACGAAATTTCA 599
|||||| | |||||||||| ||| ||
Sbjct 2320 TGGTCCTTGCTGATTCACACGGGATTCCA 2348
>seq1592
Length=309605
Score = 159 bits (176), Expect = 1e-36
Identities = 169/220 (77%), Gaps = 6/220 (3%)
Strand=Plus/Plus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 272160 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 272219
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| ||
Sbjct 272220 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 272279
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| |||| |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 272280 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 272339
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCT 354
|| | ||||||| ||||||||||||||||||||
Sbjct 272340 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT 272375
>seq2751
Length=47027
Score = 158 bits (174), Expect = 4e-36
Identities = 168/219 (77%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 138 CTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACC 197
|||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||||
Sbjct 34055 CTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACC 34114
Query 198 CCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTC 257
|||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| ||
Sbjct 34115 CCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT 34174
Query 258 TTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTGC 315
| |||| |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 34175 TCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGA 34234
Query 316 CACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCT 354
|| | ||||||| ||||||||||||||||||||
Sbjct 34235 CAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT 34269
>seq1545
Length=361571
Score = 143 bits (158), Expect = 1e-31
Identities = 167/223 (75%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 85 TGTGGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCAC 143
|| ||||| |||||| |||| ||||||||||||| || | ||| ||||| ||
Sbjct 66110 TGGGGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTAC 66051
Query 144 CTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATC 203
|||| |||||| ||| |||||||||| | | ||| ||||||||||||||||| |
Sbjct 66050 TGAAATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGC 65991
Query 204 CACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CC 262
|||| ||||||||| | ||||| || || ||||||||||||||||| | |||
Sbjct 65990 CACAAGTCATCCCCGAATTTTTCCACATACGTGGGTTCGGTCCTCCAAGGCCCGTTAGAG 65931
Query 263 CGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305
| | ||| ||||||| ||||| ||||||| | | ||||||||
Sbjct 65930 CTCTCTTTAACCTGCTCATGGCTAGATCAATCGGTTTCGGGTC 65888
Score = 109 bits (120), Expect = 2e-21
Identities = 104/132 (79%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACT--ATTTCACTCCCCGCCAGGGGTAC 505
|| |||| |||||| ||| | | |||||| || ||| ||||||| |||| |
Sbjct 65726 CTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTC 65667
Query 506 TTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565
||||||||||||||||||||||||||| |||||||||||| |||| || |||||||||
Sbjct 65666 TTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTA 65607
Query 566 ACGGGTGGTCCC 577
||||||||||
Sbjct 65606 GAGGGTGGTCCC 65595
>seq763
Length=772378
Score = 122 bits (134), Expect = 3e-25
Identities = 213/301 (71%), Gaps = 27/301 (9%)
Strand=Plus/Minus
Query 233 AGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCAC 292
||| ||||||| ||||||| || | |||| |||||| |||| ||||||||||||||
Sbjct 276793 AGTCGGTTCGGACCTCCACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCAC 276734
Query 293 TTCGCTTCGGGT-CTTGATC-GTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTAC 350
| ||||||| | | | | ||| || | ||||||| ||||||||||||||||
Sbjct 276733 CCAGGTTCGGGTCCATAAGCAGTGACAAT----TGCCCTATGAAGACTCGCTTTCGCTAC 276678
Query 351 GGCTACCCCACACGG----GTTAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCT 405
|||| || || |||||| || ||| | | | |||| ||||||||||
Sbjct 276677 GGCT---CCGGTGGGTTCCCTTAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCT 276623
Query 406 TCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC 465
|||| |||||||| |||| ||| || || | | |||| || | ||| ||
Sbjct 276622 TCAACAGGCACGCGGTCA--GGGT--CT----GG---TCCCCCTCCCACTGCTTGAGAGC 276574
Query 466 ACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGG 525
| ||||||| || ||||||||||||||| ||||| ||||||||| |||||||||||
Sbjct 276573 TTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGG 276514
Query 526 T 526
|
Sbjct 276513 T 276513
>seq43
Length=1379160
Score = 116 bits (128), Expect = 1e-23
Identities = 128/169 (76%), Gaps = 1/169 (1%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || ||||| |||||||||||||||| | | | ||| || || | ||||||
Sbjct 225050 GCTGCGCCTCAACGCATT-CGGGGAGAACCAGCTAGCTCTAGGTTCGAGTGTCATTTCAC 224992
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| | | | |||||| | ||| ||||| | ||||||| ||
Sbjct 224991 CCCTAACCACAACTCATCCGTTGATTCTTCAACATCAGTCGGTTCAGACCTCCACTTAGT 224932
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305
| |||| | |||| | || |||||||||||||| | ||||||||
Sbjct 224931 TTCACCCAAGTTTCATCATGGTCATGGATAGATCACCCAGGTTCGGGTC 224883
>seq33
Length=2198749
Score = 111 bits (122), Expect = 6e-22
Identities = 124/162 (77%), Gaps = 3/162 (2%)
Strand=Plus/Minus
Query 146 AAATGCATTTCGGGGAGAACCAGCTATC-ACGAAGTTTGATTGGCCTTTCACCCCTATCC 204
|||| |||||| ||| |||||||||| ||| || | ||||||||||||||||| ||
Sbjct 985815 AAATAGATTTCGCGGAAAACCAGCTATATACGTTCTTGG-TTGGCCTTTCACCCCTAGCC 985757
Query 205 ACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCC 263
||| ||||||||| | ||| | || || ||||||| ||||||||| | | ||| |
Sbjct 985756 ACAAGTCATCCCCGTATTTTGCCACATACGTGGGTTTGGTCCTCCAAGGCCTGTTAGAGC 985697
Query 264 GCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305
| ||||||||||| ||||| |||||| | | ||||||||
Sbjct 985696 TCTCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC 985655
>seq973
Length=298863
Score = 100 bits (110), Expect = 1e-18
Identities = 194/277 (70%), Gaps = 27/277 (10%)
Strand=Plus/Minus
Query 260 ACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCT-TGATC-GTGCCA 317
|||| |||||| |||| |||||||||||||| | |||||||| | | | ||| ||
Sbjct 119302 ACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGACA 119243
Query 318 CTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGT----TAACCT 373
| | ||||| |||||||||||||||||||| || || | |||||
Sbjct 119242 ATTGT----CCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAACCA 119190
Query 374 CGCGACACAACGCAA-ACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACC 432
|| ||| | | | |||| |||||| ||||||| |||||||| |||| ||| |
Sbjct 119189 AGC--CACTGCCTATGAGTCGCCGGCTCACTCTTCAACAGGCACGCGGTCAG--GGT--C 119136
Query 433 TAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCC 492
| || | | |||| || | ||| || | ||||||| || ||||||||||||
Sbjct 119135 T----GG---TCCCCCTCCCACTGCTTGAGAGCTTACGGTTTCATGTTCTATTTCACTCC 119083
Query 493 CCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529
||| ||||| ||||||||| |||||||||||||||
Sbjct 119082 CCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACT 119046
>seq113
Length=822347
Score = 89.7 bits (98), Expect = 2e-15
Identities = 78/96 (81%), Gaps = 1/96 (1%)
Strand=Plus/Minus
Query 482 TATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCG 541
|||| ||||||| |||| |||| ||||||||||||||||||||||| | |||| |
Sbjct 530336 TATTACACTCCCTAAATAGGGTTCTTT-CACCTTTCCCTCACGGTACTTGTACACTATTG 530278
Query 542 GTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCC 577
|||| | |||| || ||||||||| ||||||||||
Sbjct 530277 GTCATCGAGGAATACTTAGGCTTAGAGGGTGGTCCC 530242
>seq3519
Length=24458
Score = 86.0 bits (94), Expect = 2e-14
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 511 ACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGG 570
|||||||||||||||||||||| |||||||||||| |||| || ||||||||| |||
Sbjct 19837 ACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGG 19778
Query 571 TGGTCCC 577
|||||||
Sbjct 19777 TGGTCCC 19771
>seq80
Length=947797
Score = 78.8 bits (86), Expect = 3e-12
Identities = 117/166 (70%), Gaps = 5/166 (3%)
Strand=Plus/Plus
Query 143 CCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTAT 202
||| |||| ||||| |||||||||| ||| | | || || || | |||||||||||
Sbjct 33349 CCTCAATGTATTTCAGGGAGAACCAACTAGCTCTGGATTCGAGTGACATTTCACCCCTAA 33408
Query 203 CCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACC 262
||| |||||| | | ||||| || | || |||| ||||||| || | |||
Sbjct 33409 ACACTACTCATCCGGTGATTTTTCCACATCAG-----TCGGACCTCCACTTAGTTTCACC 33463
Query 263 CGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTG 308
| |||||| | || |||||||||||||| | ||||| | |||
Sbjct 33464 CAAGCTTCATCTTGGTCATGGATAGATCACCCAGGTTCGGATTTTG 33509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1816177509888
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