Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq22854 219 8e-55 seq255 219 8e-55 seq248 196 1e-47 seq31236 190 4e-46 seq317 190 4e-46 seq1488 188 1e-45 seq780 188 1e-45 seq973 152 1e-34 seq2378 132 1e-28 seq1805 127 4e-27 seq3422 123 5e-26 seq1257 123 5e-26 seq1111 100 6e-19 seq982 86.0 1e-14 seq2551 73.4 8e-11 >seq22854 Length=1460 Score = 219 bits (242), Expect = 8e-55 Identities = 233/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 721 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 662 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 661 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 602 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| ||||||| ||||||||||| |||||| | ||||||||| || | Sbjct 601 CATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 542 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| | ||| | | || | ||||||||| Sbjct 541 GCGGATTCCTCCTT------------TTGC--TTCTCAGCC--TACGGGGTATTAGCAGC 498 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 497 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 439 Query 300 CCACT 304 ||||| Sbjct 438 CCACT 434 >seq255 Length=403878 Score = 219 bits (242), Expect = 8e-55 Identities = 233/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 389082 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 389141 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 389142 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 389201 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| ||||||| ||||||||||| |||||| | ||||||||| || | Sbjct 389202 CATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 389261 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| | ||| | | || | ||||||||| Sbjct 389262 GCGGATTCCTCCTT------------TTGC--TTCTCAGCC--TACGGGGTATTAGCAGC 389305 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 389306 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 389364 Query 300 CCACT 304 ||||| Sbjct 389365 CCACT 389369 >seq248 Length=394853 Score = 196 bits (216), Expect = 1e-47 Identities = 230/308 (75%), Gaps = 20/308 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||||| | || ||||||||||||||||||||| Sbjct 377781 GGCATTGCTCCGTCAGGCTTTCGCCCATTGTGGTAAATACCCCACTGCTGCCTCCCGTAG 377840 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| ||| |||||| | | ||||| ||| Sbjct 377841 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTAATCATCCTCTCGGACTAGCTACTGAT 377900 Query 121 CGTCGGCTTGGT----GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCT 176 | ||| |||||| | ||||||| ||||||||||| |||||| | ||||||||| || Sbjct 377901 CATCGCCTTGGTAAGCGCGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCTCC 377960 Query 177 TTCAGCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGC 236 | ||| || || | | ||| | ||| | | || | ||||||||| Sbjct 377961 TCGGGCG--AATTCCT---------CCTTTTGC--TTCTCAGCC--TACGGGGTATTAGC 378005 Query 237 GTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGT 296 |||||||| ||| |||| ||| || || ||||| || ||| ||||||||||||| Sbjct 378006 AGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGAAGGTT-CTTACGCGTTACTCACCCGT 378064 Query 297 CCGCCACT 304 || ||||| Sbjct 378065 CCTCCACT 378072 >seq31236 Length=1467 Score = 190 bits (210), Expect = 4e-46 Identities = 147/175 (84%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 1204 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 1263 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 1264 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 1323 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || Sbjct 1324 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 1378 >seq317 Length=322073 Score = 190 bits (210), Expect = 4e-46 Identities = 224/300 (75%), Gaps = 20/300 (7%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| | ||||| |||| ||||||| | || || |||||||| |||||||| ||||||||| Sbjct 131005 GCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGATGCCTCCCATAGGAGTCT 130946 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| |||||| | || |||| |||| | | Sbjct 130945 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTATTGATCATGGC 130886 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GAT 185 |||||| | ||||| || |||||||| |||||| | ||||||||| || | || ||| Sbjct 130885 CTTGGTAAGGTATTACCTTACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGGGCGGAT 130826 Query 186 AAATCTTTGGTCAAAGAATGATGC-CATCCTCTGACATTATGCGGTATTAGCGTTCGTTT 244 || || || | | |||||| ||| ||||||||| ||||| Sbjct 130825 TCCTCCTT---------TTGCTTCTCATCCT---ACA-----GGGTATTAGCAGCCGTTT 130783 Query 245 CCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 ||| ||| |||| ||| || |||||||| || ||| ||||||||||||||||||||| Sbjct 130782 CCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCGCCACT 130724 >seq1488 Length=468551 Score = 188 bits (208), Expect = 1e-45 Identities = 219/293 (75%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||||| |||| |||||| | || || |||||||||||||||| |||| ||||||||||| Sbjct 242048 TCAGGCTTTCGCCCATTTCGGAAAATTCCCCACTGCTGCCTCCTGTAGAAGTCTGGGCCG 241989 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 ||||||||||||| ||||| | ||| || ||| | || ||||| |||| ||| |||||| Sbjct 241988 TGTCTCAGTCCCAGTGTGGTTGATCATCCCCTCGGACCAGCTACTGATCATCGCCTTGGT 241929 Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GATAAATCT 191 ||||||| ||||||||||| |||||| | ||||||||| || || ||| || Sbjct 241928 AAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCCCGGGCGGATTCCTCC 241869 Query 192 TTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACG 251 || ||| | ||| | | || | ||||||||| |||||||| | Sbjct 241868 TT------------TTGC--TTCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGCTG 241825 Query 252 TTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || |||| ||| || |||||||| || ||| ||||||||||||||||||||| Sbjct 241824 TTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCGCCACT 241773 >seq780 Length=650642 Score = 188 bits (208), Expect = 1e-45 Identities = 219/293 (75%), Gaps = 18/293 (6%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||||| |||| ||||||| | || || ||||||||| |||||||||||||||||||||| Sbjct 273672 TCAGGCTTTCGCCCATTGCGGAAAATTTCCCACTGCTACCTCCCGTAGGAGTCTGGGCCG 273731 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 ||||||||||||| |||||| | ||| |||||| | || ||||| |||| ||| |||||| Sbjct 273732 TGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGT 273791 Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAG-CGATAAATCT 191 ||||||| ||||||||||| |||||| | ||||||| | || | | ||| || Sbjct 273792 AAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCGCCTCCTCGGGTGGATTCCTCC 273851 Query 192 TTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACG 251 || ||| | ||| | | || | ||||||||| ||||| || | Sbjct 273852 TT------------TTGC--TTCTCAGCC--TACGGGGTATTAGCAGCCGTTTTCAGCTG 273895 Query 252 TTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || |||| ||| || |||||||| || ||| |||||||||||||| |||||| Sbjct 273896 TTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCTGCCACT 273947 >seq973 Length=298863 Score = 152 bits (168), Expect = 1e-34 Identities = 113/132 (86%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||||| || || ||||||||||||||||||||| Sbjct 119653 GGCATTGCTTCGTCAGGCTTTCGCCCATTGTGGAAAATTCCCCACTGCTGCCTCCCGTAG 119712 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 119713 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 119772 Query 121 CGTCGGCTTGGT 132 | ||| |||||| Sbjct 119773 CATCGCCTTGGT 119784 >seq2378 Length=68098 Score = 132 bits (146), Expect = 1e-28 Identities = 121/153 (79%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 9111 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 9052 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 9051 GGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 8992 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| || |||||||||||||| Sbjct 8991 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 8959 >seq1805 Length=178059 Score = 127 bits (140), Expect = 4e-27 Identities = 91/105 (87%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 54707 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 54648 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTC 105 ||||||||||||||||||||||||| |||||| | ||| |||||| Sbjct 54647 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTC 54603 >seq3422 Length=26285 Score = 123 bits (136), Expect = 5e-26 Identities = 118/151 (78%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||| | |||||| Sbjct 787 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCATGGGAGTCC 846 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 847 GGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 906 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTA 157 |||||| || ||| || |||||||||||| Sbjct 907 CTTGGTCAGCCTTTACCTGACCAACTACCTA 937 >seq1257 Length=141525 Score = 123 bits (136), Expect = 5e-26 Identities = 118/151 (78%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||| | |||||| Sbjct 119431 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCATGGGAGTCC 119372 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 119371 GGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 119312 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTA 157 |||||| || ||| || |||||||||||| Sbjct 119311 CTTGGTCAGCCTTTACCTGACCAACTACCTA 119281 >seq1111 Length=227953 Score = 100 bits (110), Expect = 6e-19 Identities = 64/70 (91%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 34 AATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCC 93 || || |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 47791 AAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCT 47850 Query 94 GTTCAACCTC 103 | ||| |||| Sbjct 47851 GATCATCCTC 47860 >seq982 Length=285417 Score = 86.0 bits (94), Expect = 1e-14 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 40 CCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAA 99 ||||||||||||| ||||| |||||| |||||||||||||||||| |||||| | ||| Sbjct 2641 CCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCGTTGTGGCTGATCAT 2582 Query 100 CCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCT 144 || || || |||| ||| | |||||||| || |||| || Sbjct 2581 CCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCATTACCT 2537 >seq2551 Length=59699 Score = 73.4 bits (80), Expect = 8e-11 Identities = 63/77 (82%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 228 GGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTA 287 ||||||||| |||||||| ||| |||| ||| || |||||||| || ||| |||| Sbjct 33167 GGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTA 33109 Query 288 CTCACCCGTCCGCCACT 304 ||||||||||||||||| Sbjct 33108 CTCACCCGTCCGCCACT 33092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997618632192