Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27]
78,262 sequences; 869,795,571 total letters
Query= AAMG01001946.1
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
seq14 78.8 9e-13
seq570 75.2 1e-11
>seq14
Length=1475405
Score = 78.8 bits (86), Expect = 9e-13
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||| | |||||||| || | ||| |||||||||| | || |||||| ||||
Sbjct 1048131 GTTGAGCGACGACCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTG 1048072
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129
||||| || ||| ||| |||||| ||| ||||||||||||
Sbjct 1048071 CTCGACGGGTGGGTCTTGCACTCAAGCTCCCTTCTGCCATTGCACT 1048026
>seq570
Length=166132
Score = 75.2 bits (82), Expect = 1e-11
Identities = 82/109 (75%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||| ||||||||| | | || ||||||||||||| || |||||| |||
Sbjct 32814 GTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 32873
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132
|||| | ||| |||| |||||| || |||||| ||||| | || ||
Sbjct 32874 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 32922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 473240933944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |