Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27]
78,262 sequences; 869,795,571 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq22854 273 5e-71
seq31236 268 2e-69
seq1488 226 7e-57
seq2378 217 4e-54
seq255 120 7e-25
seq4206 86.0 2e-14
seq2125 84.2 5e-14
seq780 84.2 5e-14
seq1070 82.4 2e-13
seq37 80.6 6e-13
>seq22854
Length=1460
Score = 273 bits (302), Expect = 5e-71
Identities = 305/405 (75%), Gaps = 2/405 (0%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|| ||| |||| ||||||||| |||||||||||||||||||||| ||| || |||
Sbjct 787 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGC 846
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || ||||||| | || |||
Sbjct 847 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 906
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||| | ||| |||| | | |||||||
Sbjct 907 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 966
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| |||||||||||||||||| || | | |||||||| ||||||
Sbjct 967 GAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAA 1026
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | |||||||||||| ||||||| ||||||| || |||||
Sbjct 1027 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 1086
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363
|||||||| ||||||| ||||||||||||| |||||||| | | | ||| || |
Sbjct 1087 AGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCC 1145
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | ||| | ||| ||||| ||||||| || |||||||||||
Sbjct 1146 GTGCAGTGTTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 1190
>seq31236
Length=1467
Score = 268 bits (296), Expect = 2e-69
Identities = 299/397 (75%), Gaps = 2/397 (1%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||
Sbjct 1130 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 1071
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|||| | ||||||||||| || |||||||| || ||||||| | || ||| | | ||
Sbjct 1070 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGG 1011
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192
|||||||| || || | |||||| | ||| |||| | | ||||||| |||||
Sbjct 1010 CTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 951
Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252
| | ||| |||||||||||||||||| || | | |||||||| |||||| || |
Sbjct 950 TTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCT 891
Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312
||||| | | |||||||||||| ||||||| ||||||| || |||||||||||||
Sbjct 890 GCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCC 831
Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTG 371
||||||| ||||||||||||| |||||||| | | | ||| || | | | |||
Sbjct 830 CAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAGTG 772
Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| ||| ||||| ||||||| || |||||||||||
Sbjct 771 TTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 735
>seq1488
Length=468551
Score = 226 bits (250), Expect = 7e-57
Identities = 247/327 (76%), Gaps = 1/327 (0%)
Strand=Plus/Plus
Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78
||||||||| |||||||||||||||| || || ||| || ||||||||||||||| |
Sbjct 242140 CGGCTAACTCTGTGCCAGCAGCCGCGGGAAGACAGAGGATGCAAGCGTTATCCGGAATGA 242199
Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138
||||||||||| || |||||||| || ||||||| | || ||| | | ||||||||
Sbjct 242200 TTGGGCGTAAAGCGTATGTAGGTGGCTTTTTAAGTCCGTCGTCAAATCCCAAGGCTCAAC 242259
Query 139 CCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAG 198
|| || || | || |||| | | ||| |||| | | ||||||| |||||| |
Sbjct 242260 CCTGG-ACAACGTTGGAAAATACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTTCGG 242318
Query 199 TGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGA 258
| |||| ||||||||||||| || | |||||||| |||||| || ||||||
Sbjct 242319 TAGAGCGCTGAAATGCGTAGAGATCGAAAAGAACACCAACGGCGAAAGCACTCTGCTGGG 242378
Query 259 CTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 318
| | ||||||||| || ||||| | ||||||| || |||||||||||||| ||||
Sbjct 242379 CCGACACTGACACTAAGAGACGAAATCTAGGGGAGCGAATGGGATTAGATACCCTAGTAG 242438
Query 319 TCCACGCCGTAAACGATGAATACTAGG 345
||| ||||||||||||| ||||||||
Sbjct 242439 TCCTAGCCGTAAACGATGGATACTAGG 242465
>seq2378
Length=68098
Score = 217 bits (240), Expect = 4e-54
Identities = 254/340 (75%), Gaps = 10/340 (3%)
Strand=Plus/Plus
Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCT 61
||| ||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||
Sbjct 9182 ACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCA 9241
Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121
|| ||| | |||||| ||||||||||||||| |||||| ||| | || | |||
Sbjct 9242 AGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTG 9301
Query 122 AAAGGCTATGGCTCAACCCCG-GGACTGCTTTTGAAAC---TGCAGGGCTAGAGTGCAGG 177
|||| | | | || | | ||| |||| | ||||| | || || | |||
Sbjct 9302 AAAGTC---GCCAAAAACTGGCGGAATGCTCTCGAAACCAATTCA---CTTGGGTGAGAC 9355
Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237
|| || ||||||||| | |||||| |||||||| || | || | | |||||| |||
Sbjct 9356 AGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGCAAATCTACGAAGGAACGCCAA 9415
Query 238 TGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297
|||||||| ||| |||| || ||| ||| || ||||||| |||||||| ||
Sbjct 9416 AAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAA 9475
Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337
||||||||||||||||||||||||| ||||||||||||||
Sbjct 9476 CAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGA 9515
>seq255
Length=403878
Score = 120 bits (132), Expect = 7e-25
Identities = 105/131 (80%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||
Sbjct 389008 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 388949
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|||| | ||||||||||| || |||||||| || ||||||| | || ||| | | ||
Sbjct 388948 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGG 388889
Query 133 CTCAACCCCGG 143
|||||||| ||
Sbjct 388888 CTCAACCCTGG 388878
>seq4206
Length=13527
Score = 86.0 bits (94), Expect = 2e-14
Identities = 73/90 (81%), Gaps = 4/90 (4%)
Strand=Plus/Minus
Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGG----CTAGCGTTATCCGGA 74
||||||||| ||||||||||| |||||||| ||| ||||| | || ||| | ||||
Sbjct 4536 CGGCTAACTCCGTGCCAGCAGTCGCGGTAAGACGGGGGGGGGGGGCAAGTGTTCTTCGGA 4477
Query 75 ATTACTGGGCGTAAAGGGTGCGTAGGTGGT 104
|| ||||||||||||||| |||||| |||
Sbjct 4476 ATGACTGGGCGTAAAGGGCACGTAGGCGGT 4447
>seq2125
Length=90154
Score = 84.2 bits (92), Expect = 5e-14
Identities = 112/153 (73%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 186 GTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAG 245
||| |||| | ||||| |||||||| |||| |||| | ||||| ||| || |||
Sbjct 85687 GTGTAATTTCGTGTGTAAGGGTGAAATCCGTAAATATACGAAGGAATGCCAAAAGCAAAG 85628
Query 246 GCGGCTTGCTGGA-CTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
| || ||| | || | ||| || || |||| | |||||||| |||||||||
Sbjct 85627 GTAACTCTTTGGGTCCCTATC-GACGCTTGGGTGAGAAAACATGGGGAGCGAACAGGATT 85569
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGA 337
||||||| |||||||||| |||||| |||||||
Sbjct 85568 AGATACCTTGGTAGTCCATGCCGTATACGATGA 85536
>seq780
Length=650642
Score = 84.2 bits (92), Expect = 5e-14
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||
Sbjct 273586 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 273527
Query 73 GAATTACTGGGCGTAAAGGGT 93
|||| | ||| ||||||| ||
Sbjct 273526 GAATGATTGGACGTAAAGCGT 273506
>seq1070
Length=219458
Score = 82.4 bits (90), Expect = 2e-13
Identities = 54/60 (90%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCT 61
||| ||||| |||||||||||||||| |||||||||||||||||||| ||| |||||||
Sbjct 140930 ACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCT 140989
>seq37
Length=1785839
Score = 80.6 bits (88), Expect = 6e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCA 322
|||||| ||| || ||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 820599 ACTGACGCTGGGGTGCGAAAGCATGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCA 820541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1202258351616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |