Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq7442 206 9e-51 seq1592 190 7e-46 seq224 183 1e-43 seq2751 127 7e-27 seq3364 96.9 1e-17 seq1511 84.2 7e-14 seq52 77.0 1e-11 seq44 77.0 1e-11 >seq7442 Length=2782 Score = 206 bits (228), Expect = 9e-51 Identities = 395/570 (69%), Gaps = 23/570 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 231 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 290 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 291 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 349 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| || || || ||| |||||||||| || Sbjct 350 AGAAACTGTCTACCTGAAACTGTCCCTTGGCCCGTAGGTCCTGGCACAAGGTTAGAATTC 409 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | || || | |||| | Sbjct 410 TAGCCCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAG-GAGGCCT--T 466 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | || ||||||| || | || || || | || |||||| ||| | | |||| Sbjct 467 CTTCGCCTTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGGAACAGTG 524 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 525 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 584 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| |||| | ||||||| | || |||||||||| ||||||| |||||| Sbjct 585 TTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 643 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 644 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 703 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 |||||||| | ||| ||| || || | | |||| | ||||||||| Sbjct 704 CGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTAACCTT 757 Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 || |||| ||||||||||||| || |||| Sbjct 758 CCGGCACTGGGCAGGCGTCAGCCCCCATAC 787 >seq1592 Length=309605 Score = 190 bits (210), Expect = 7e-46 Identities = 388/564 (69%), Gaps = 23/564 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 270625 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 270684 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 270685 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 270743 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | | |||||| || || || || |||||||||| || Sbjct 270744 AGAAACTGTCTACCTGAGAATGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 270803 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | || || | |||| | Sbjct 270804 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT--T 270860 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | || ||||||| || | || || || | || |||||| ||| | | ||| Sbjct 270861 CTTCGCCTTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGGAACAGTA 270918 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 270919 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 270978 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| |||| | ||||||| | || |||||||||| ||||||| |||||| Sbjct 270979 TTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 271037 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 271038 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 271097 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 |||||||| | ||| ||| || || || | |||| | ||| ||||| Sbjct 271098 CGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCGTCAGGTCACCAACTTCCTTGACCTT 271151 Query 531 CCAGCACCGGGCAGGCGTCAGTCC 554 || |||| ||||||||||||| || Sbjct 271152 CCGGCACTGGGCAGGCGTCAGCCC 271175 >seq224 Length=468181 Score = 183 bits (202), Expect = 1e-43 Identities = 390/570 (68%), Gaps = 23/570 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 5708 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 5767 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 5768 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 5826 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | | |||||| || || || || |||||||||| || Sbjct 5827 AGAAACTGTCTACCTGAGAATGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 5886 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | || || | |||| | Sbjct 5887 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT--T 5943 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | || ||||||| || | || || || | || |||||| ||| | | ||| Sbjct 5944 CTTCGCCTTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGGAACAGTA 6001 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 6002 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 6061 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||| ||| |||| | ||||||| | || |||||||||| ||||||| |||||| Sbjct 6062 TTTCCCCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 6120 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 6121 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 6180 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 |||||||| | ||| ||| || || | | |||| | ||| ||||| Sbjct 6181 CGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTT 6234 Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 || |||| ||||||||||||| || |||| Sbjct 6235 CCGGCACTGGGCAGGCGTCAGCCCCCATAC 6264 >seq2751 Length=47027 Score = 127 bits (140), Expect = 7e-27 Identities = 134/175 (77%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 32572 TCGTTACGCCTTTCGTGCGGGTCGGAAATTACCCGACAAGGAATTTCGCTACCTTAGGAC 32631 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGG 505 |||||||||| |||||||| | ||||||||| | ||| ||| || || Sbjct 32632 CGTTATAGTTATGGCCGCCGTTCAGTGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCA 32685 Query 506 TGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 | |||| | ||| ||||||| |||| ||||||||||||| || |||| Sbjct 32686 TCAAGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 32740 Score = 82.4 bits (90), Expect = 3e-13 Identities = 280/429 (65%), Gaps = 11/429 (3%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| || || Sbjct 32119 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGACAATCTCC 32178 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| |||||||||||| |||||||||| | | ||||||| Sbjct 32179 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTA-CGCCCCAT 32237 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | || | | |||||| || || || || |||||||||| || Sbjct 32238 AGAAACTGTCTACATGAGAATGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 32297 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCAT 237 | | ||||||||||| ||| | | ||| | || | | || | || | Sbjct 32298 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGACCCCCCGGAAGGGGGCCTTCTT 32357 Query 238 AGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGAA- 294 | || ||||||| || | || || | | || |||||| ||| | | ||| || Sbjct 32358 CGCCTTCCACCTAAGCTGCGCAGGAAAAG--TCCAAAGCCAATCCCAGGGAACAGTAAAC 32415 Query 295 GGTCCCGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354 || |||||||| |||| | || | | ||||||| || | | |||| Sbjct 32416 CTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTT 32475 Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAAC 413 ||||| |||| | ||||||| | || |||||||||| ||||||| |||||||| Sbjct 32476 CACCGAGCCTCTCTCCGAGACAG-TGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAAA 32534 Query 414 TTACCCGAC 422 |||||| || Sbjct 32535 TTACCCNAC 32543 >seq3364 Length=27722 Score = 96.9 bits (106), Expect = 1e-17 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||||| ||| ||||||||| |||||||||||||||| ||||| |||||||||||| Sbjct 17392 GAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATT 17333 Query 431 TCGCTACCTTA 441 ||||||||||| Sbjct 17332 TCGCTACCTTA 17322 >seq1511 Length=404814 Score = 84.2 bits (92), Expect = 7e-14 Identities = 142/204 (70%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 240319 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 240378 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| |||||||||||| |||||||||| | | ||||||| Sbjct 240379 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTA-CGCCCCAT 240437 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | | |||||| || || || || |||||||||| || Sbjct 240438 AGAAACTGTCTACCTGAGAATGTCCCTTGGCCCATAGGTCCTGACACAAGGTTAGAATTC 240497 Query 178 CACTACGGTCAGAGTGGTATTTCA 201 | | ||||||||||| ||| Sbjct 240498 TAGCTCTTCCAGAGTGGTATCTCA 240521 >seq52 Length=1114353 Score = 77.0 bits (84), Expect = 1e-11 Identities = 59/69 (86%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 389 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGT 448 ||||||| ||| ||| |||| ||||||||| ||||| |||||| ||||||||||| || Sbjct 394272 TTACGCCTTTCATGCGGGTCAGAACTTACC-GACAACGAATTTTTCTACCTTAGGACCGT 394214 Query 449 TATAGTTAC 457 ||||||||| Sbjct 394213 TATAGTTAC 394205 >seq44 Length=1175378 Score = 77.0 bits (84), Expect = 1e-11 Identities = 94/127 (74%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 966847 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 966788 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| |||||||||||| |||||||||| | | ||||||| Sbjct 966787 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTA-CGCCCCAT 966729 Query 121 TTAAACT 127 ||||| Sbjct 966728 AGAAACT 966722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701067667712