Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27]
78,262 sequences; 869,795,571 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq7442 206 9e-51
seq1592 190 7e-46
seq224 183 1e-43
seq2751 127 7e-27
seq3364 96.9 1e-17
seq1511 84.2 7e-14
seq52 77.0 1e-11
seq44 77.0 1e-11
>seq7442
Length=2782
Score = 206 bits (228), Expect = 9e-51
Identities = 395/570 (69%), Gaps = 23/570 (4%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| || |||| |||||||||||||||| ||| || ||||| | || ||
Sbjct 231 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 290
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|| | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 291 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 349
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177
||||| | ||| | |||||||| || || || ||| |||||||||| ||
Sbjct 350 AGAAACTGTCTACCTGAAACTGTCCCTTGGCCCGTAGGTCCTGGCACAAGGTTAGAATTC 409
Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234
| | ||||||||||| ||| | | ||| | | || || | |||| |
Sbjct 410 TAGCCCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAG-GAGGCCT--T 466
Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292
| | | || ||||||| || | || || || | || |||||| ||| | | ||||
Sbjct 467 CTTCGCCTTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGGAACAGTG 524
Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351
||| | | |||||||| |||| | || | | ||||||| || | | |
Sbjct 525 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 584
Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410
|||||||| |||| | ||||||| | || |||||||||| ||||||| ||||||
Sbjct 585 TTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 643
Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 644 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 703
Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530
|||||||| | ||| ||| || || | | |||| | |||||||||
Sbjct 704 CGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTAACCTT 757
Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
|| |||| ||||||||||||| || ||||
Sbjct 758 CCGGCACTGGGCAGGCGTCAGCCCCCATAC 787
>seq1592
Length=309605
Score = 190 bits (210), Expect = 7e-46
Identities = 388/564 (69%), Gaps = 23/564 (4%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| || |||| |||||||||||||||| ||| || ||||| | || ||
Sbjct 270625 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 270684
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|| | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 270685 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 270743
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177
||||| | ||| | | |||||| || || || || |||||||||| ||
Sbjct 270744 AGAAACTGTCTACCTGAGAATGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 270803
Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234
| | ||||||||||| ||| | | ||| | | || || | |||| |
Sbjct 270804 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT--T 270860
Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292
| | | || ||||||| || | || || || | || |||||| ||| | | |||
Sbjct 270861 CTTCGCCTTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGGAACAGTA 270918
Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351
||| | | |||||||| |||| | || | | ||||||| || | | |
Sbjct 270919 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 270978
Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410
|||||||| |||| | ||||||| | || |||||||||| ||||||| ||||||
Sbjct 270979 TTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 271037
Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 271038 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 271097
Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530
|||||||| | ||| ||| || || || | |||| | ||| |||||
Sbjct 271098 CGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCGTCAGGTCACCAACTTCCTTGACCTT 271151
Query 531 CCAGCACCGGGCAGGCGTCAGTCC 554
|| |||| ||||||||||||| ||
Sbjct 271152 CCGGCACTGGGCAGGCGTCAGCCC 271175
>seq224
Length=468181
Score = 183 bits (202), Expect = 1e-43
Identities = 390/570 (68%), Gaps = 23/570 (4%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| || |||| |||||||||||||||| ||| || ||||| | || ||
Sbjct 5708 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 5767
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|| | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 5768 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 5826
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177
||||| | ||| | | |||||| || || || || |||||||||| ||
Sbjct 5827 AGAAACTGTCTACCTGAGAATGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 5886
Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234
| | ||||||||||| ||| | | ||| | | || || | |||| |
Sbjct 5887 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT--T 5943
Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292
| | | || ||||||| || | || || || | || |||||| ||| | | |||
Sbjct 5944 CTTCGCCTTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGGAACAGTA 6001
Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351
||| | | |||||||| |||| | || | | ||||||| || | | |
Sbjct 6002 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 6061
Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410
|||| ||| |||| | ||||||| | || |||||||||| ||||||| ||||||
Sbjct 6062 TTTCCCCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 6120
Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 6121 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 6180
Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530
|||||||| | ||| ||| || || | | |||| | ||| |||||
Sbjct 6181 CGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTT 6234
Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
|| |||| ||||||||||||| || ||||
Sbjct 6235 CCGGCACTGGGCAGGCGTCAGCCCCCATAC 6264
>seq2751
Length=47027
Score = 127 bits (140), Expect = 7e-27
Identities = 134/175 (77%), Gaps = 6/175 (3%)
Strand=Plus/Plus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445
|||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 32572 TCGTTACGCCTTTCGTGCGGGTCGGAAATTACCCGACAAGGAATTTCGCTACCTTAGGAC 32631
Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGG 505
|||||||||| |||||||| | ||||||||| | ||| ||| || ||
Sbjct 32632 CGTTATAGTTATGGCCGCCGTTCAGTGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCA 32685
Query 506 TGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
| |||| | ||| ||||||| |||| ||||||||||||| || ||||
Sbjct 32686 TCAAGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 32740
Score = 82.4 bits (90), Expect = 3e-13
Identities = 280/429 (65%), Gaps = 11/429 (3%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| || |||| |||||||||||||||| ||| || ||||| || ||
Sbjct 32119 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGACAATCTCC 32178
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|| | | |||| |||||||| |||||||||||| |||||||||| | | |||||||
Sbjct 32179 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTA-CGCCCCAT 32237
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177
||||| | || | | |||||| || || || || |||||||||| ||
Sbjct 32238 AGAAACTGTCTACATGAGAATGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 32297
Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCAT 237
| | ||||||||||| ||| | | ||| | || | | || | || |
Sbjct 32298 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGACCCCCCGGAAGGGGGCCTTCTT 32357
Query 238 AGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGAA- 294
| || ||||||| || | || || | | || |||||| ||| | | ||| ||
Sbjct 32358 CGCCTTCCACCTAAGCTGCGCAGGAAAAG--TCCAAAGCCAATCCCAGGGAACAGTAAAC 32415
Query 295 GGTCCCGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354
|| |||||||| |||| | || | | ||||||| || | | ||||
Sbjct 32416 CTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTT 32475
Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAAC 413
||||| |||| | ||||||| | || |||||||||| ||||||| ||||||||
Sbjct 32476 CACCGAGCCTCTCTCCGAGACAG-TGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAAA 32534
Query 414 TTACCCGAC 422
|||||| ||
Sbjct 32535 TTACCCNAC 32543
>seq3364
Length=27722
Score = 96.9 bits (106), Expect = 1e-17
Identities = 64/71 (90%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430
|||||||| ||| ||||||||| |||||||||||||||| ||||| ||||||||||||
Sbjct 17392 GAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATT 17333
Query 431 TCGCTACCTTA 441
|||||||||||
Sbjct 17332 TCGCTACCTTA 17322
>seq1511
Length=404814
Score = 84.2 bits (92), Expect = 7e-14
Identities = 142/204 (70%), Gaps = 4/204 (2%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| || |||| |||||||||||||||| ||| || ||||| | || ||
Sbjct 240319 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 240378
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|| | | |||| |||||||| |||||||||||| |||||||||| | | |||||||
Sbjct 240379 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTA-CGCCCCAT 240437
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177
||||| | ||| | | |||||| || || || || |||||||||| ||
Sbjct 240438 AGAAACTGTCTACCTGAGAATGTCCCTTGGCCCATAGGTCCTGACACAAGGTTAGAATTC 240497
Query 178 CACTACGGTCAGAGTGGTATTTCA 201
| | ||||||||||| |||
Sbjct 240498 TAGCTCTTCCAGAGTGGTATCTCA 240521
>seq52
Length=1114353
Score = 77.0 bits (84), Expect = 1e-11
Identities = 59/69 (86%), Gaps = 1/69 (1%)
Strand=Plus/Minus
Query 389 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGT 448
||||||| ||| ||| |||| ||||||||| ||||| |||||| ||||||||||| ||
Sbjct 394272 TTACGCCTTTCATGCGGGTCAGAACTTACC-GACAACGAATTTTTCTACCTTAGGACCGT 394214
Query 449 TATAGTTAC 457
|||||||||
Sbjct 394213 TATAGTTAC 394205
>seq44
Length=1175378
Score = 77.0 bits (84), Expect = 1e-11
Identities = 94/127 (74%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| || |||| |||||||||||||||| ||| || ||||| | || ||
Sbjct 966847 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 966788
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|| | | |||| |||||||| |||||||||||| |||||||||| | | |||||||
Sbjct 966787 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTA-CGCCCCAT 966729
Query 121 TTAAACT 127
|||||
Sbjct 966728 AGAAACT 966722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1701067667712
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