Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27]
78,262 sequences; 869,795,571 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq22854 127 4e-27
seq255 125 2e-26
seq31236 122 2e-25
seq780 118 2e-24
seq2378 114 3e-23
seq973 114 3e-23
seq317 113 1e-22
seq1488 104 5e-20
seq1805 96.9 7e-18
seq248 96.9 7e-18
seq3422 93.3 9e-17
seq1257 93.3 9e-17
seq1111 82.4 2e-13
>seq22854
Length=1460
Score = 127 bits (140), Expect = 4e-27
Identities = 195/279 (70%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| || ||| || |
Sbjct 823 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 775
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| || ||| | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 774 GC------TTCTTCTCCGGGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 722
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 721 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 662
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 661 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 602
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || ||||| | || |||| |||||
Sbjct 601 CATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAAT 563
>seq255
Length=403878
Score = 125 bits (138), Expect = 2e-26
Identities = 148/199 (74%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | |||| | ||||| ||| ||||| | | ||| |||| ||
Sbjct 389043 AAAAGAAGTTCACGACCCGTGGG-CCTTCTGCCTCCACGCGGCATTGCTCCGTCAGGCTT 389101
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 389102 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 389161
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||||| || | ||||||| || | ||| ||| | | || ||| || ||
Sbjct 389162 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 389221
Query 261 ACCCCGCCTACTACCTAAT 279
||| | || |||| |||||
Sbjct 389222 ACCTCACCAACTAGCTAAT 389240
>seq31236
Length=1467
Score = 122 bits (134), Expect = 2e-25
Identities = 147/199 (74%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | |||| | ||||| ||| ||||| | | ||| |||| ||
Sbjct 1165 AAAAGAAGTTCACGACCCGTGGG-CCTTCTGCCTCCACGCGGCATTGCTCCGTCAGGCTT 1223
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 1224 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 1283
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||||| || | ||||||| || | ||| ||| | | || ||| || ||
Sbjct 1284 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 1343
Query 261 ACCCCGCCTACTACCTAAT 279
|| | || |||| |||||
Sbjct 1344 GCCTCACCAACTAGCTAAT 1362
>seq780
Length=650642
Score = 118 bits (130), Expect = 2e-24
Identities = 193/279 (69%), Gaps = 18/279 (6%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | ||| |||
Sbjct 273558 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCGGATAC---------------CGT 273602
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| | || ||| | |||||||||| || | |||| | ||||| ||| || ||
Sbjct 273603 C--ATTTCTTCTTCTCCGGGAAAAGAAGTTCACGACCCGTGGG-CCTTCTGCCTCCATGC 273659
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
|| | ||| |||| || ||| |||||| || ||| | ||||||| ||||||||||
Sbjct 273660 GACATTGCTCTGTCAGGCTTTCGCCCATTGCGGAAAATTTCCCACTGCTACCTCCCGTAG 273719
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 273720 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 273779
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || ||||| | || |||| |||||
Sbjct 273780 CATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAAT 273818
>seq2378
Length=68098
Score = 114 bits (126), Expect = 3e-23
Identities = 160/223 (72%), Gaps = 1/223 (0%)
Strand=Plus/Minus
Query 82 AAAGAAGTTTACAATCCGTAGAACC-TTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
||||| ||||||| | | | ||| ||| || |||||| | | ||||| || | ||
Sbjct 9157 AAAGAGCTTTACAAGCGGCATTACCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTT 9098
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| |||| ||||| |||||||||| ||||| ||||| || |||||||||||
Sbjct 9097 TCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAG 9038
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| || ||||| || | ||| ||| | ||| |||| | |||| ||| ||| ||
Sbjct 9037 TCCCGGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTT 8978
Query 261 ACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCG 303
||| || |||||||||| ||||| | |||| ||| ||
Sbjct 8977 ACCTGACCAACTACCTAATACTACGCAGGCTCATCAAACAGCG 8935
>seq973
Length=298863
Score = 114 bits (126), Expect = 3e-23
Identities = 115/148 (78%), Gaps = 1/148 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | |||| | ||||| ||| ||||| | | ||| |||| ||
Sbjct 119614 AAAAGAAGTTCACGACCCGTGGG-CCTTCTGCCTCCACGCGGCATTGCTTCGTCAGGCTT 119672
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 119673 TCGCCCATTGTGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 119732
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228
| ||| ||||| || | ||||||| ||
Sbjct 119733 TCCCAGTGTGGCTGATCATCCTCTCGGA 119760
>seq317
Length=322073
Score = 113 bits (124), Expect = 1e-22
Identities = 145/199 (73%), Gaps = 1/199 (1%)
Strand=Plus/Minus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | |||| | ||||| | | ||||| || | ||| |||| ||
Sbjct 131050 AAAAGAAGTTCACGACCCGTGGG-CCTTCTGCTTCCACGCGACATTGCTCCGTCAGGCTT 130992
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| ||||| |||||||| ||||||| ||| |||||||||||
Sbjct 130991 TCGCCCATTGCGGAAAATTCCCCACTGATGCCTCCCATAGGAGTCTGGGCCGTGTCTCAG 130932
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||||| || | ||||||| || | |||| ||| | | || ||| | ||
Sbjct 130931 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTATTGATCATGGCCTTGGTAAGGTATT 130872
Query 261 ACCCCGCCTACTACCTAAT 279
||| || |||| |||||
Sbjct 130871 ACCTTACCAACTAGCTAAT 130853
>seq1488
Length=468551
Score = 104 bits (114), Expect = 5e-20
Identities = 143/199 (72%), Gaps = 1/199 (1%)
Strand=Plus/Minus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | |||| | ||||| ||| ||||| | | || |||| ||
Sbjct 242099 AAAAGAAGTTCACGACCCGTGGG-CCTTCTGCCTCCACGCGGCATTTCTCCGTCAGGCTT 242041
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| ||||| || ||||| ||||||||||||| |||| ||| ||| |||||||||||
Sbjct 242040 TCGCCCATTTCGGAAAATTCCCCACTGCTGCCTCCTGTAGAAGTCTGGGCCGTGTCTCAG 241981
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||||| || | ||| ||| || | ||| ||| | | || ||| || ||
Sbjct 241980 TCCCAGTGTGGTTGATCATCCCCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 241921
Query 261 ACCCCGCCTACTACCTAAT 279
||| | || |||| |||||
Sbjct 241920 ACCTCACCAACTAGCTAAT 241902
>seq1805
Length=178059
Score = 96.9 bits (106), Expect = 7e-18
Identities = 79/96 (82%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192
|||| || ||| |||||| || ||||| |||||||||||||||||||||| ||| |||
Sbjct 54695 TCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 54636
Query 193 TGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228
||||||||| ||| ||||| || | ||||||| ||
Sbjct 54635 TGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGA 54600
>seq248
Length=394853
Score = 96.9 bits (106), Expect = 7e-18
Identities = 111/148 (75%), Gaps = 1/148 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | ||| | ||||| ||| ||||| | | ||| |||| ||
Sbjct 377742 AAAAGAAGTTCACGACACGTGGG-CCTTCTGCCTCCACGCGGCATTGCTCCGTCAGGCTT 377800
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| | || || |||||||||||||||||||||| ||| |||||||||||
Sbjct 377801 TCGCCCATTGTGGTAAATACCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 377860
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228
| ||| ||||| | | ||||||| ||
Sbjct 377861 TCCCAGTGTGGCTAATCATCCTCTCGGA 377888
>seq3422
Length=26285
Score = 93.3 bits (102), Expect = 9e-17
Identities = 111/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186
||||| || | || ||| |||||| |||| ||||| |||||||||| ||| | |||||
Sbjct 787 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCATGGGAGTCC 846
Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGG 246
|| |||||||||||| || ||||| || | ||| ||| | ||| |||| | ||
Sbjct 847 GGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 906
Query 247 CTAGGTGGGCCGTTACCCCGCCTACTACCTA 277
|| ||| ||| ||||| || ||||||||
Sbjct 907 CTTGGTCAGCCTTTACCTGACCAACTACCTA 937
>seq1257
Length=141525
Score = 93.3 bits (102), Expect = 9e-17
Identities = 111/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186
||||| || | || ||| |||||| |||| ||||| |||||||||| ||| | |||||
Sbjct 119431 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCATGGGAGTCC 119372
Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGG 246
|| |||||||||||| || ||||| || | ||| ||| | ||| |||| | ||
Sbjct 119371 GGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 119312
Query 247 CTAGGTGGGCCGTTACCCCGCCTACTACCTA 277
|| ||| ||| ||||| || ||||||||
Sbjct 119311 CTTGGTCAGCCTTTACCTGACCAACTACCTA 119281
>seq1111
Length=227953
Score = 82.4 bits (90), Expect = 2e-13
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 154 AATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGG 213
|| ||||| |||||||||||||||||||||| ||| |||||||||||| ||| |||||
Sbjct 47791 AAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCT 47850
Query 214 GACCTTCCTC 223
|| | |||||
Sbjct 47851 GATCATCCTC 47860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1067963535744
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