Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq22854 127 4e-27 seq255 125 2e-26 seq31236 122 2e-25 seq780 118 2e-24 seq2378 114 3e-23 seq973 114 3e-23 seq317 113 1e-22 seq1488 104 5e-20 seq1805 96.9 7e-18 seq248 96.9 7e-18 seq3422 93.3 9e-17 seq1257 93.3 9e-17 seq1111 82.4 2e-13 >seq22854 Length=1460 Score = 127 bits (140), Expect = 4e-27 Identities = 195/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| || ||| || | Sbjct 823 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 775 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | |||||||||| || | |||| | ||||| ||| ||||| Sbjct 774 GC------TTCTTCTCCGGGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 722 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 721 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 662 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 661 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 602 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || ||||| | || |||| ||||| Sbjct 601 CATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAAT 563 >seq255 Length=403878 Score = 125 bits (138), Expect = 2e-26 Identities = 148/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||| | ||||| ||| ||||| | | ||| |||| || Sbjct 389043 AAAAGAAGTTCACGACCCGTGGG-CCTTCTGCCTCCACGCGGCATTGCTCCGTCAGGCTT 389101 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 389102 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 389161 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || | ||| ||| | | || ||| || || Sbjct 389162 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 389221 Query 261 ACCCCGCCTACTACCTAAT 279 ||| | || |||| ||||| Sbjct 389222 ACCTCACCAACTAGCTAAT 389240 >seq31236 Length=1467 Score = 122 bits (134), Expect = 2e-25 Identities = 147/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||| | ||||| ||| ||||| | | ||| |||| || Sbjct 1165 AAAAGAAGTTCACGACCCGTGGG-CCTTCTGCCTCCACGCGGCATTGCTCCGTCAGGCTT 1223 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 1224 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 1283 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || | ||| ||| | | || ||| || || Sbjct 1284 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 1343 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 1344 GCCTCACCAACTAGCTAAT 1362 >seq780 Length=650642 Score = 118 bits (130), Expect = 2e-24 Identities = 193/279 (69%), Gaps = 18/279 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | ||| ||| Sbjct 273558 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCGGATAC---------------CGT 273602 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | | || ||| | |||||||||| || | |||| | ||||| ||| || || Sbjct 273603 C--ATTTCTTCTTCTCCGGGAAAAGAAGTTCACGACCCGTGGG-CCTTCTGCCTCCATGC 273659 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 || | ||| |||| || ||| |||||| || ||| | ||||||| |||||||||| Sbjct 273660 GACATTGCTCTGTCAGGCTTTCGCCCATTGCGGAAAATTTCCCACTGCTACCTCCCGTAG 273719 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 273720 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 273779 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || ||||| | || |||| ||||| Sbjct 273780 CATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAAT 273818 >seq2378 Length=68098 Score = 114 bits (126), Expect = 3e-23 Identities = 160/223 (72%), Gaps = 1/223 (0%) Strand=Plus/Minus Query 82 AAAGAAGTTTACAATCCGTAGAACC-TTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 ||||| ||||||| | | | ||| ||| || |||||| | | ||||| || | || Sbjct 9157 AAAGAGCTTTACAAGCGGCATTACCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTT 9098 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| |||| ||||| |||||||||| ||||| ||||| || ||||||||||| Sbjct 9097 TCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAG 9038 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | || ||||| || | ||| ||| | ||| |||| | |||| ||| ||| || Sbjct 9037 TCCCGGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTT 8978 Query 261 ACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCG 303 ||| || |||||||||| ||||| | |||| ||| || Sbjct 8977 ACCTGACCAACTACCTAATACTACGCAGGCTCATCAAACAGCG 8935 >seq973 Length=298863 Score = 114 bits (126), Expect = 3e-23 Identities = 115/148 (78%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||| | ||||| ||| ||||| | | ||| |||| || Sbjct 119614 AAAAGAAGTTCACGACCCGTGGG-CCTTCTGCCTCCACGCGGCATTGCTTCGTCAGGCTT 119672 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 119673 TCGCCCATTGTGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 119732 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228 | ||| ||||| || | ||||||| || Sbjct 119733 TCCCAGTGTGGCTGATCATCCTCTCGGA 119760 >seq317 Length=322073 Score = 113 bits (124), Expect = 1e-22 Identities = 145/199 (73%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||| | ||||| | | ||||| || | ||| |||| || Sbjct 131050 AAAAGAAGTTCACGACCCGTGGG-CCTTCTGCTTCCACGCGACATTGCTCCGTCAGGCTT 130992 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| ||||| |||||||| ||||||| ||| ||||||||||| Sbjct 130991 TCGCCCATTGCGGAAAATTCCCCACTGATGCCTCCCATAGGAGTCTGGGCCGTGTCTCAG 130932 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || | |||| ||| | | || ||| | || Sbjct 130931 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTATTGATCATGGCCTTGGTAAGGTATT 130872 Query 261 ACCCCGCCTACTACCTAAT 279 ||| || |||| ||||| Sbjct 130871 ACCTTACCAACTAGCTAAT 130853 >seq1488 Length=468551 Score = 104 bits (114), Expect = 5e-20 Identities = 143/199 (72%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||| | ||||| ||| ||||| | | || |||| || Sbjct 242099 AAAAGAAGTTCACGACCCGTGGG-CCTTCTGCCTCCACGCGGCATTTCTCCGTCAGGCTT 242041 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| ||||| || ||||| ||||||||||||| |||| ||| ||| ||||||||||| Sbjct 242040 TCGCCCATTTCGGAAAATTCCCCACTGCTGCCTCCTGTAGAAGTCTGGGCCGTGTCTCAG 241981 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||| ||| || | ||| ||| | | || ||| || || Sbjct 241980 TCCCAGTGTGGTTGATCATCCCCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 241921 Query 261 ACCCCGCCTACTACCTAAT 279 ||| | || |||| ||||| Sbjct 241920 ACCTCACCAACTAGCTAAT 241902 >seq1805 Length=178059 Score = 96.9 bits (106), Expect = 7e-18 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192 |||| || ||| |||||| || ||||| |||||||||||||||||||||| ||| ||| Sbjct 54695 TCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 54636 Query 193 TGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228 ||||||||| ||| ||||| || | ||||||| || Sbjct 54635 TGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGA 54600 >seq248 Length=394853 Score = 96.9 bits (106), Expect = 7e-18 Identities = 111/148 (75%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | ||| | ||||| ||| ||||| | | ||| |||| || Sbjct 377742 AAAAGAAGTTCACGACACGTGGG-CCTTCTGCCTCCACGCGGCATTGCTCCGTCAGGCTT 377800 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| | || || |||||||||||||||||||||| ||| ||||||||||| Sbjct 377801 TCGCCCATTGTGGTAAATACCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 377860 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228 | ||| ||||| | | ||||||| || Sbjct 377861 TCCCAGTGTGGCTAATCATCCTCTCGGA 377888 >seq3422 Length=26285 Score = 93.3 bits (102), Expect = 9e-17 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186 ||||| || | || ||| |||||| |||| ||||| |||||||||| ||| | ||||| Sbjct 787 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCATGGGAGTCC 846 Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGG 246 || |||||||||||| || ||||| || | ||| ||| | ||| |||| | || Sbjct 847 GGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 906 Query 247 CTAGGTGGGCCGTTACCCCGCCTACTACCTA 277 || ||| ||| ||||| || |||||||| Sbjct 907 CTTGGTCAGCCTTTACCTGACCAACTACCTA 937 >seq1257 Length=141525 Score = 93.3 bits (102), Expect = 9e-17 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186 ||||| || | || ||| |||||| |||| ||||| |||||||||| ||| | ||||| Sbjct 119431 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCATGGGAGTCC 119372 Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGG 246 || |||||||||||| || ||||| || | ||| ||| | ||| |||| | || Sbjct 119371 GGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 119312 Query 247 CTAGGTGGGCCGTTACCCCGCCTACTACCTA 277 || ||| ||| ||||| || |||||||| Sbjct 119311 CTTGGTCAGCCTTTACCTGACCAACTACCTA 119281 >seq1111 Length=227953 Score = 82.4 bits (90), Expect = 2e-13 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 154 AATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGG 213 || ||||| |||||||||||||||||||||| ||| |||||||||||| ||| ||||| Sbjct 47791 AAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCT 47850 Query 214 GACCTTCCTC 223 || | ||||| Sbjct 47851 GATCATCCTC 47860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1067963535744