Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq752 104 2e-17 seq66 100 2e-16 >seq752 Length=99127 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || ||||||| ||| |||| ||| || || ||||| | |||||||||||| || Sbjct 74451 ATCCACAGTGAACTTGATAGCATCAGCTGCTGCTCGTGTCCTTAAATAGTACATGCCAGT 74510 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 ||| | || || ||| ||||| || |||| || | ||| ||| || |||| || | Sbjct 74511 CTTCAAACCCTTACTCCATGCATAAAAGTGCAGAGAAGTTAACTTTCCAAAATTGGGTTG 74570 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 ||| || ||||||| |||||| ||||| ||| ||| ||||| || || ||||| Sbjct 74571 CTCCATGTGAATATTCAGGCTCTGACTTTGATCAATGAAACATCCACGGTCAGCTGCCAT 74630 Query 65257 GTCAA 65261 ||||| Sbjct 74631 GTCAA 74635 >seq66 Length=1001823 Score = 100 bits (110), Expect = 2e-16 Identities = 247/372 (66%), Gaps = 11/372 (3%) Strand=Plus/Plus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| ||||| ||||| ||||||||||| | ||| || || || | || ||||| Sbjct 952558 ATGTACAAGAAGGCTGAAGCCTCCTTCTGGACAGCGGAAGAAGTAGACCTCTCACAAGAC 952617 Query 61156 ATGAATGACTGGGA----GCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTT 61211 | | | ||||| ||| | | || || || ||||| || || | ||| | | Sbjct 952618 AACCGTCATTGGGAAACCGCGCTCACCG-CCGACGAGCAACACTTTATCACCCATATCCT 952676 Query 61212 GGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCA 61271 || ||||| ||||| || ||||| || ||| || ||| | | | ||| | | Sbjct 952677 CGCCTTCTTCGCCGCCTCCGACGGCATAGTCCTAGAAAATCTCGCCGGCAGATTCATGAA 952736 Query 61272 GGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGT 61331 ||||| || || | |||||||| |||||||| ||||| || || || || || | Sbjct 952737 AGAGGTCCAGGTTGCTGAGGCGCGCGCCTTCTACGGGTTCCAAATAGCAATCGAAAACAT 952796 Query 61332 CCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGA 61391 |||||| || |||||| | | ||| | || || ||||||| || | || | | | Sbjct 952797 CCACTCCGAAATGTACTCTCTCCTCCTAGAAACCTACATCAAAGA---CTCAGAGCTTAA 952853 Query 61392 A---CGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGC 61448 | | | ||| || |||||||| || || |||||| ||||||||| ||||| Sbjct 952854 ATCCCACCTCTTCCGAGCAATCGAGACCATCCCCTGCGTGAAGAAGAAAGCGGAGTGGGC 952913 Query 61449 CTTCAATTGGAT 61460 | || ||||| Sbjct 952914 CCTCCGATGGAT 952925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397188792435680