Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tarenaya_20hassleriana_20[refseq_20GCF_5F000463585.1_202013-09-05] 12,249 sequences; 249,929,577 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq11031 80.6 1e-13 seq9413 80.6 1e-13 seq8580 80.6 1e-13 seq7902 80.6 1e-13 seq6689 80.6 1e-13 seq6620 80.6 1e-13 seq5683 80.6 1e-13 seq5119 80.6 1e-13 seq4983 80.6 1e-13 seq7651 75.2 5e-12 seq6261 75.2 5e-12 seq10094 71.6 6e-11 seq7313 71.6 6e-11 seq3658 71.6 6e-11 >seq11031 Length=10548 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 4020 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 4078 >seq9413 Length=20192 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 14261 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 14203 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 16283 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 16341 >seq8580 Length=25508 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 16674 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 16732 >seq7902 Length=42133 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 24085 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 24143 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 40325 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 40267 >seq6689 Length=82222 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 70351 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 70409 Score = 78.8 bits (86), Expect = 4e-13 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 1618 GAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 1675 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||| Sbjct 57145 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCA 57201 >seq6620 Length=85379 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 3943 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 4001 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 69115 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 69173 >seq5683 Length=2377369 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 11467 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 11409 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 49868 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 49926 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 56620 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 56562 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 68188 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 68130 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 92997 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 92939 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| ||| ||||| |||||||| Sbjct 10864 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCAAACCGGGAATAGCCCAGC 10922 >seq5119 Length=206144 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 4619 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 4561 >seq4983 Length=222310 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 7235 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 7177 >seq7651 Length=538 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| ||||| |||||| |||| ||||| |||||||| Sbjct 94 GGAAAAGAAACTAACAAGGATTCCCCTAGTAATGGCGAGCGAACCGGGAATAGCCCAGC 36 >seq6261 Length=323 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||| ||| Sbjct 207 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCTAGC 265 >seq10094 Length=327 Score = 71.6 bits (78), Expect = 6e-11 Identities = 48/54 (89%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGC 54 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| ||| Sbjct 221 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGC 168 >seq7313 Length=56266 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| | ||||||||| |||| ||||| |||||||| Sbjct 28056 GGAAAAGAAACTAACAAGGATTCCCCTATAAACGGCGAGCGAACCGGGAATAGCCCAGC 27998 >seq3658 Length=208 Score = 71.6 bits (78), Expect = 6e-11 Identities = 52/59 (88%), Gaps = 1/59 (2%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| |||| |||| |||||||| Sbjct 196 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAAC-CGGAATAGCCCAGC 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230373542160