Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq7 82.4 4e-14 >seq7 Length=21614486 Score = 82.4 bits (90), Expect = 4e-14 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||| ||||||||||||||||| ||| ||| || ||||| ||| |||||| | Sbjct 21436778 GAACCTAAAGACTTTGATTTCTCATAAAATGCTGATGGAGTCTTAATAGCAACATCCGCA 21436719 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 ||||||||| |||| |||| | |||||| || || |||||| ||| ||||| Sbjct 21436718 AATCCCTAGTTAGCATTATTTATGTTTAAGATTAAAACAGTATCTAATCATCTTC 21436664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278398875090