Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq7 125 3e-26 >seq7 Length=21614486 Score = 125 bits (138), Expect = 3e-26 Identities = 123/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 39 CGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAA 98 ||||| ||||||||||||||| |||| |||| |||| |||||||||| || || || ||| Sbjct 21437372 CGAGTTGAGTTGTTTGGGAATCCAGCCCTAATTGGGTGGTAAATTTCGTCCAAGGCAAAA 21437431 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || || |||||| ||||||| ||||||| ||| |||| |||||| | || ||| | Sbjct 21437432 TACGAGCAAGAGACTGATAGCGAACAAGTACCATGAAGGAAAAATGAAAGGGACGTTGAA 21437491 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||| |||| || || | ||||||||| | || |||| Sbjct 21437492 AAGTGAGTCAATGAGTGCTTGAAATTGTCGGGAGAGAAG 21437530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079990755050