Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq298 235 2e-59 seq3150 217 6e-54 seq2278 210 9e-52 seq2455 190 9e-46 seq166 178 5e-42 seq717 150 7e-34 seq4367 123 1e-25 seq545 80.6 1e-12 >seq298 Length=195704 Score = 235 bits (260), Expect = 2e-59 Identities = 225/283 (80%), Gaps = 9/283 (3%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| | Sbjct 127992 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 128051 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 ||||||| | || || ||| ||| || || || ||| | ||||||||| |||| Sbjct 128052 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 128108 Query 523 CGATCCTGATGTCTTCGGAT--GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||| | |||| |||| || || || |||| |||||| |||| ||||||||||||| Sbjct 128109 CGACCTTGAT--CTTCAGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGA 128166 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| Sbjct 128167 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGA 128226 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 128227 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 128269 Score = 199 bits (220), Expect = 2e-48 Identities = 217/283 (77%), Gaps = 9/283 (3%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| ||||||||||||||||||| |||| | | ||||| |||| | Sbjct 116063 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTTCGAGTCAACAGGTGAGTA 116122 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 ||||||| | || || ||| ||| || || || ||| | ||||||||| |||| Sbjct 116123 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 116179 Query 523 CGATCCTGATGTCTTCGGAT--GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 | | | |||| |||| || || || |||| || ||| |||| ||||||||||||| Sbjct 116180 CAACCTTGAT--CTTCAGAGAAGGGTTCGAGTGTGACCATGCCTGTCGGGACCCGAAAGA 116237 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||||||||||| ||| ||| ||||||||||||||||||||||||||| |||||| Sbjct 116238 TGGTGAACTATGCATGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCTGCAGCGA 116297 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | ||| ||||||||| || Sbjct 116298 TACTGACGTGCAAATCGTTCGTCTGACTTGAGTATAGGGGTGA 116340 Score = 163 bits (180), Expect = 1e-37 Identities = 135/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 127605 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 127664 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| ||| |||||||||||||| ||||||| | || |||||||||||| |||| Sbjct 127665 TAAATATGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 127724 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 127725 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 127769 Score = 134 bits (148), Expect = 6e-29 Identities = 136/178 (76%), Gaps = 13/178 (7%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||||| ||| |||||||||||||| | || || |||||||| | || || || Sbjct 115663 TCTACGAGTCGGGTTATTTGGGAATGCAGCCCCAATCGGACGGTAAATTCCGTCCAAGGC 115722 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTA----GA---------GTGATCGAAAG 141 ||||||| ||| |||||||||||||| ||||||| || | || |||| Sbjct 115723 TAAATATGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAGTACCGCGAGGTAAAG 115782 Query 142 ATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| |||||| ||||||||| ||| || | ||||||||| | |||||||||| Sbjct 115783 ATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGAAGGGAAGCG 115840 >seq3150 Length=44403 Score = 217 bits (240), Expect = 6e-54 Identities = 221/283 (78%), Gaps = 9/283 (3%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| ||||| ||||||||||||| ||| | ||| ||| ||||| | Sbjct 11058 CGACCCGTCTTGAAACACAGACCAAGGAGTCTGGCATGTGTGCAAGTCAACGGGTGAGTA 11117 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 ||||||| | || || ||| ||| | || || ||| | ||||||||| |||| Sbjct 11118 AACCCGTAAGGCGCAAGGAAGCTGATTAGCGG---GATCCCTCGTGGGTGCACCGCCGAC 11174 Query 523 CGATCCTGATGTCTTCGGAT--GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||| | |||| |||| || || || |||| |||||| |||| ||||||||||||| Sbjct 11175 CGACCTTGAT--CTTCAGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGA 11232 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| Sbjct 11233 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGA 11292 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 11293 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 11335 >seq2278 Length=30574 Score = 210 bits (232), Expect = 9e-52 Identities = 216/279 (77%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| | Sbjct 21195 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 21136 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 ||||||| | || || ||| || | || |||| | | ||||||||| |||| Sbjct 21135 AACCCGTAAGGCGCAAGGAAGCTG---GTTGGCGGGAGCTCTCACGGGTGCACCGCCGAC 21079 Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 ||| | |||| | | || ||||| ||| |||||| |||| |||||||| |||||| Sbjct 21078 CGACCTTGATCTTTAGAGAAGGATTCCAGTGTGAGCATGCCTGTCGGGACCCGGAAGATG 21019 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||| | Sbjct 21018 GTGAACTATGCCTGAGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCTGCAGCGATA 20959 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 ||| |||||||||| ||||| | |||||| ||||||| Sbjct 20958 CTGACGTGCAAATCATTCGTCTGACTTGGGTGTAGGGGC 20920 Score = 203 bits (224), Expect = 1e-49 Identities = 219/284 (77%), Gaps = 11/284 (4%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT--GTC 462 || ||||||||| |||||||||||| |||||| |||| | ||||||| |||| || Sbjct 17623 CGACCCGTCTTGAAACACGGACCAAAGAGTCTGACATGTGTGCGAGTCAACGGGTAAGT- 17565 Query 463 AAACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGA 521 |||||||| | || || ||| ||| || | || ||| | |||||||| ||| Sbjct 17564 AAACCCGTAAGGCGCAAGGAAGCTGATTGGCAG---GATCCCTCGCAGGTGCACCGCCGA 17508 Query 522 CCGATCCTGATGTCTTCGGAT--GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579 | || | |||| |||| || || || |||| |||||| || | |||||| ||||| Sbjct 17507 CTGACCTTGAT--CTTCAGAGAAGGGTTCGAGTGTGAGCATGCCTTTCGGGACCAGAAAG 17450 Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639 |||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| Sbjct 17449 ATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCTGCAGCG 17390 Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 17389 ATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 17346 Score = 145 bits (160), Expect = 3e-32 Identities = 135/170 (79%), Gaps = 6/170 (4%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||||| |||||||||||| ||||| |||| ||| |||||||| | || || || Sbjct 18016 TCTACGAGTCGGGTTGTTTGGGAAGGCAGCCCTAATCGGGCGGTAAATTCCATCCAAGGC 17957 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTA-GAGT-----GATCGAAAGATGAAAA 148 ||||||| ||| |||||||||||||| ||||||| ||| || ||||||||||| Sbjct 17956 TAAATATGGGCGAGAGACCGATAGCGAACAAGTACCAGTACCGCGAGGTAAAGATGAAAA 17897 Query 149 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 | |||||| ||||||||| ||| || | ||||||||| |||||||| Sbjct 17896 GGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCAGGAGGGAAGC 17847 Score = 140 bits (154), Expect = 1e-30 Identities = 127/160 (79%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||| | |||||||||||||||||| | || ||| | |||||| | || || ||||||| Sbjct 21519 GAGTTGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGATAAATTCCGTCCAAGGCTAAAT 21460 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || ||| ||| |||||||||| ||||||| | || |||||||||||| |||||| || Sbjct 21459 ATGGGCGAGAAACCGATAGCGAACAAGTACTGCGAGGTAAAGATGAAAAGGACTTTGAAA 21400 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||| ||| || | ||||||| | | ||||||||| Sbjct 21399 AGAGAGTCAAAGAGTGCTTGAAATTATCGGGAGGGAAGCG 21360 >seq2455 Length=27407 Score = 190 bits (210), Expect = 9e-46 Identities = 212/278 (76%), Gaps = 9/278 (3%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-AAAC 466 ||||||||| ||||| |||||| |||||| |||| | | |||| ||||| |||| Sbjct 12507 CCCGTCTTGAAACACAGACCAAAGAGTCTGACATGTGAGTGAGTCAACGGGTGAGTAAAC 12566 Query 467 CCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGA 525 ||| | || || ||| ||| || || || ||| ||||||| || ||||||| Sbjct 12567 CCGCAAGACGCAAGGAAGCTGATTGGCGG---GATCCCTCACGGGTGCATCACCGACCGA 12623 Query 526 TCCTGATGTCTTCGGAT--GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583 | |||| |||| || || ||||||| |||||| |||| || || |||||||||| Sbjct 12624 CCTTGAT--CTTCAGAGAAGGGTTTGAGTGTGAGCATGCCTGTAGGTACTCGAAAGATGG 12681 Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643 |||||||||||| | | | ||||||||||||||||||||||||||| ||||||| | | Sbjct 12682 TGAACTATGCCTAAGCGGCGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATAC 12741 Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 || ||||||||||| ||||| | |||||||||||||| Sbjct 12742 TGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGC 12779 >seq166 Length=247233 Score = 178 bits (196), Expect = 5e-42 Identities = 212/283 (75%), Gaps = 16/283 (6%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| |||||||| |||| |||| | ||||||| |||||| | Sbjct 111619 CGACCCGTCTTGAAACACGGA-------GTCTGACATGTGTGCGAGTCAATGGGTGAGTA 111671 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 |||| || | | || ||| ||| || || || ||| | || ||||| | || Sbjct 111672 AACCTGTAAGGCACAAGGAAGTTGATTGGCGG---GATCCCTCGCGGATGCACTGCCCAC 111728 Query 523 CGATCCTGATGTCTTCGGAT--GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||| | |||| |||| || ||||| |||| || ||| |||| ||||||||||||| Sbjct 111729 CGACCTTGAT--CTTCAGAGAAGGATTCGAGTGTGAACATGCCTGTCGGGACCCGAAAGA 111786 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||||||||| ||||| |||| |||||||||| |||||||||||||||| ||||||| Sbjct 111787 TGGTGAACTATACCTGAGCAGGGCGAAGCCAGAGAAAACTCTGGTGGAGGCCCGCAGCGA 111846 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | || ||||||||||||| Sbjct 111847 TACTGACGTGCAAATCGTTCGTCTGACTTAGGTATAGGGGCGA 111889 >seq717 Length=192076 Score = 150 bits (166), Expect = 7e-34 Identities = 106/121 (88%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct 175549 CTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCT 175490 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 |||| |||| ||||| | | ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 175489 GGTGCAGGCCCGCAGTGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCG 175430 Query 683 A 683 | Sbjct 175429 A 175429 Score = 129 bits (142), Expect = 2e-27 Identities = 125/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 38 ACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAA 97 ||||||| ||| |||||||||||||| | || ||| || ||||| | || || ||||| Sbjct 160054 ACGAGTCAGGTTTTTTGGGAATGCAGCCCCAATCGGGCGGAAAATTCCGTCCAAGGCTAA 159995 Query 98 ATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGG 157 |||| ||| ||||||||| |||| ||||||| | || ||||||||||| |||||| Sbjct 159994 ATATGGGCGAGAGACCGACAGCGAACAAGTACCGCGAGGTAAAGATGAAAATGACTTTGA 159935 Query 158 AAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 ||| ||||| ||| || | |||||| || | |||||||| Sbjct 159934 AAATAGAGTCAAAGAGTGCTTGAAATGGTCGGGAGGGAAGC 159894 Score = 123 bits (136), Expect = 1e-25 Identities = 125/165 (76%), Gaps = 11/165 (7%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 181489 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGTGGTAAATTCCGTCCAAGGC 181430 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 || ||||||||||||| ||||||| | || |||||||||||| |||| Sbjct 181429 TA-----------GAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 181381 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| |||||| | | || |||| | ||||||||| Sbjct 181380 TGAAAAGAGAGTCAAAAAGTGCTTAAAGTTGTCGGGAGGGAAGCG 181336 Score = 107 bits (118), Expect = 8e-21 Identities = 80/94 (85%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || || ||||| |||||||||||||||||| |||| ||| |||||||| | || || || Sbjct 176020 TCTACAAGTCGGGTTGTTTGGGAATGCAGCCCTAATCGGGCGGTAAATTCCGTCCAAGGC 175961 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTA 128 ||||||| ||| |||||||||||||| ||||||| Sbjct 175960 TAAATATGGGCGAGAGACCGATAGCGAACAAGTA 175927 >seq4367 Length=7022 Score = 123 bits (136), Expect = 1e-25 Identities = 117/147 (80%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||| ||| || ||||| ||| |||| |||||| | | ||||| ||||||| Sbjct 4744 GAGTCGGTTTGCTTGAGAGTGCAGACTTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 4803 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | ||| |||||||||||| |||||||| |||| ||||| ||||||| |||||| | Sbjct 4804 AT-GACCACGAGACCGATAGCACACAAGTACCGTGAGGGAAAGGTGAAAAGAACTTTGAA 4862 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTG 185 |||||||| || || |||||||| || Sbjct 4863 GAGAGAGTTCAAGAGTACGTGAAACTG 4889 Score = 89.7 bits (98), Expect = 2e-15 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 5482 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGCCAGGACGAAGTCAGG 5541 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645 |||||| ||| |||||| || |||| ||||| Sbjct 5542 GGAAACCCTGATGGAGGTCCGTAGCGATTCTG 5573 Score = 75.2 bits (82), Expect = 5e-11 Identities = 69/87 (79%), Gaps = 3/87 (3%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGG---TGT 461 || ||||||||| |||||||||||||||||||||||| | |||||| ||||| || Sbjct 5296 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGCGCGAGTCATTGGGCTCTGC 5355 Query 462 CAAACCCGTGCGCGTAATGAAAGTGAA 488 ||||| ||| |||||||||||| Sbjct 5356 GAAACCTAAAGGCGAAATGAAAGTGAA 5382 >seq545 Length=141175 Score = 80.6 bits (88), Expect = 1e-12 Identities = 122/169 (72%), Gaps = 6/169 (4%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTT-GTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 || |||||| ||||| ||||||||||||| | | || | | ||||| |||| || || Sbjct 33018 TCTACGAGT-GAGTTTGTTTGGGAATGCAACCCCAATCGAGTGGTAATTTTCGTCCAAGA 32960 Query 94 C---TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGC 150 | ||||||| || ||| | |||||| |||||||| | |||||||| || Sbjct 32959 CTAATAAATATAAGCGAGATATTGATAGCAAACAAGTAGCACAAGGTAAAGATGATAAAA 32900 Query 151 ACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||| ||| ||||| ||| || | |||| |||||| ||||||||| Sbjct 32899 ACTTTTCAAA-AGAGTCAAATAGTGCTTGAAGTTGTTGGGAGGGAAGCG 32852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079854826400