Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trifolium_20pratense_20[genbank_20GCA_5F900079335.1_202016-04-15]
39,051 sequences; 345,990,850 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq20907 120 3e-25
>seq20907
Length=607
Score = 120 bits (132), Expect = 3e-25
Identities = 137/176 (78%), Gaps = 10/176 (6%)
Strand=Plus/Plus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| | || |||||| ||||||||| || |||||| ||||||||||
Sbjct 53 GGTGGATGCCTTGACTGGTAAAGGCGATGAAGGACGTACTAGACTGCGATAAGCTACGGG 112
Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAG 126
|| || || | | | ||||||||||||| ||||||||||||||||| || || | |||
Sbjct 113 GAGCTGTCA-AGAAGCTTTGATCCGTAGATTTCCGAATGGGGCAACCCAATGTA-TAGAG 170
Query 127 ATATATCATAACGCTAGGCGTTAG--GCGAACGTGGGGAACTGAAACATCTAAGTA 180
||||| ||| || ||| ||| ||||||| |||||| |||||||||| ||||
Sbjct 171 ATATA-CATTAC-CTA---TATAGGAGCGAACGAGGGGAATTGAAACATCTTAGTA 221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476619623431
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |