Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trifolium_20pratense_20[genbank_20GCA_5F900079335.1_202016-04-15]
39,051 sequences; 345,990,850 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq20748 91.5 1e-16
seq38520 80.6 3e-13
>seq20748
Length=620
Score = 91.5 bits (100), Expect = 1e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 187 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 246
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| |||||||||||| |||||||
Sbjct 247 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 281
>seq38520
Length=214065
Score = 80.6 bits (88), Expect = 3e-13
Identities = 68/84 (81%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 69 CGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGAC 128
||||||||||| |||||||||| ||||||||| || ||| | |||| || ||||
Sbjct 88437 CGACTGTTTATCAAAAACACAGGTCTCTGCAAAGTCGTAAGACCATGTATGGGAGTTGAC 88496
Query 129 GCCTGCCCGGTGCCGGAAGGTTAA 152
|||||||| ||| |||||||||||
Sbjct 88497 GCCTGCCCAGTGTCGGAAGGTTAA 88520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476619623431
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |