Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20pratense_20[genbank_20GCA_5F900079335.1_202016-04-15] 39,051 sequences; 345,990,850 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq38843 111 3e-22 >seq38843 Length=32602 Score = 111 bits (122), Expect = 3e-22 Identities = 78/89 (88%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 251 GTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCG 310 ||| |||||||||||||||||| |||| ||||||| |||||| || ||||| |||||||| Sbjct 18223 GTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCG 18282 Query 311 CTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| ||||||||||| ||| || |||||| Sbjct 18283 CTCAACGGATAAAAGTTACTCTAGGGATA 18311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982016362976