Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1852 80.6 1e-13 seq1431 77.0 1e-12 >seq1852 Length=45573 Score = 80.6 bits (88), Expect = 1e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||| Sbjct 44721 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAACCGGGATAAGCCCA 44665 >seq1431 Length=89469 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| |||||||||| |||||||||||| |||| |||| |||||| Sbjct 67583 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGATAAGCCCA 67527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230340764160