Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq761 82.4 1e-13 >seq761 Length=212653 Score = 82.4 bits (90), Expect = 1e-13 Identities = 70/86 (81%), Gaps = 3/86 (3%) Strand=Plus/Plus Query 186 GATGGGCAAAATAGTAAATTGACAAAGAT---TGATGTTCCTGATGAATTTTCTGGATTT 242 || |||||||| ||||| ||| |||||| | |||||||||||| |||||||| ||| Sbjct 193280 GAAGGGCAAAACCGTAAAATGAGAAAGATAAGTAATGTTCCTGATGGTTTTTCTGGGTTT 193339 Query 243 GTGCAATCTGGATGCTGTGTGGAGAT 268 || |||||||| |||||||| || || Sbjct 193340 GTTCAATCTGGGTGCTGTGTTGAAAT 193365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918148137984