Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq2319 434 1e-116 seq432 260 2e-64 seq1296 208 8e-49 seq200 158 1e-33 seq264 109 6e-19 seq1196 107 2e-18 seq177 107 2e-18 seq26 107 2e-18 seq5156 104 3e-17 seq2312 104 3e-17 seq2286 104 3e-17 seq814 104 3e-17 seq1868 102 9e-17 seq485 102 9e-17 seq318 100 3e-16 seq2162 98.7 1e-15 seq96 96.9 4e-15 seq2280 91.5 2e-13 >seq2319 Length=57875 Score = 434 bits (480), Expect = 1e-116 Identities = 452/593 (76%), Gaps = 0/593 (0%) Strand=Plus/Minus Query 160202 CCAGTCGCTGCTGCTTCTGCTGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCC 160261 ||||| || |||||| |||| || ||| | ||||||| | |||||||| || || Sbjct 18582 CCAGTTGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGTCAGGGAAGCTTTTCA 18523 Query 160262 GATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAA 160321 |||| ||||||||| || |||||||||||||| |||| |||| ||||||| || || || Sbjct 18522 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAG 18463 Query 160322 CACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCT 160381 || ||||| |||||||||||||| |||||| | ||||| ||||| |||||||| || || Sbjct 18462 CATAATATTCTTATGCATCCGTTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCC 18403 Query 160382 CTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAA 160441 || ||| ||||||||| || || |||| ||||||||| | |||| || || |||||| Sbjct 18402 CTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAA 18343 Query 160442 ACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTC 160501 | ||| || ||| | ||||||| ||||||||||||||||| || || || || || Sbjct 18342 AATGAATCTGCGAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTA 18283 Query 160502 GCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGC 160561 || || ||||| || || || || |||||||||||||| || || |||||||| || Sbjct 18282 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATACGCTAGTTTCAACAACTCTCGT 18223 Query 160562 TCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGT 160621 ||| | || |||||||| |||||||||||||| || || |||||||| || || | ||| Sbjct 18222 TCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGT 18163 Query 160622 GTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAAC 160681 | ||| ||||| |||||| | ||||| || || || ||||| ||| || | || Sbjct 18162 ATCAGTACTATGGCTTTCAATTTAAATGGATTTAATTTTAACCAATCCGTCGTTGATTCT 18103 Query 160682 CAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAA 160741 ||||| | || | ||||| ||||| || | ||||||| ||| || || |||||| Sbjct 18102 CAAGGTCGTGTAATTAACACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAA 18043 Query 160742 GTCATGCACGAGCGTAACGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 160794 || ||||| || ||||||||||| || |||||||| ||||| ||||| | ||| Sbjct 18042 GTTATGCATGAACGTAACGCTCATAATTTCCCTCTAGACCTAGCTGCGGTTGA 17990 >seq432 Length=331984 Score = 260 bits (288), Expect = 2e-64 Identities = 382/535 (71%), Gaps = 4/535 (1%) Strand=Plus/Plus Query 161731 CATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCA 161789 |||||| || || || || ||||||||||| || || || ||||| | | ||| || Sbjct 47490 CATTCT-TTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCGTTGGTGTCA 47548 Query 161790 ACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTCAT 161849 | | || || || |||| |||||| || || ||||| ||||||| | || || || || Sbjct 47549 ATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCTTTCGGATTAATAGGTTTTAT 47608 Query 161850 GCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTATTGCTT 161908 | | ||||| |||||||||||||| ||| || | | || ||||| ||||| || || | Sbjct 47609 GTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGGCCTTATAATGCAATCGCAT 47667 Query 161909 TCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACAGTCGT 161968 |||| ||||| |||||||||||||| || || || || ||||| ||||| ||||| Sbjct 47668 TCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGTCAGTCTG 47727 Query 161969 CCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTTTCCTAC 162028 |||||||| || || ||||| || || ||||| || | ||| | || || | | Sbjct 47728 GTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATTCTCTTTTTCC 47787 Query 162029 AAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTATCTTGG 162088 |||| || || |||||||| | || || || || |||||||| || || ||| | |||| Sbjct 47788 AAGGGTTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGG 47847 Query 162089 GTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACCAAGATG 162148 | | || | | | |||||||| || | || || ||||| || | | |||||| Sbjct 47848 GCGCCGCCCTATTATGCGCTATTCATGGCGCTACCGTAGAAAATACCTTATTTGAAGATG 47907 Query 162149 GTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGA 162208 | || |||||||| ||| |||||| || | || |||| ||| || ||||| || | Sbjct 47908 GGGATGGTGCAAATACATTCCGTGCTTTTAACCCAACCCAAGCGGAAGAAACTTATTCAA 47967 Query 162209 TGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAA 162263 |||| || || ||||| || ||||| || ||||| || |||||||| ||||| Sbjct 47968 TGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAA 48022 >seq1296 Length=110557 Score = 208 bits (230), Expect = 8e-49 Identities = 186/233 (80%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 160256 TTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTTGTATTCCAA 160315 || || |||| ||||||||| || |||||||||||||| |||| |||| ||||||| || Sbjct 75580 TTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAG 75521 Query 160316 GCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGT 160375 || || || ||||| |||||||||||||| |||||| | ||||| ||||| |||||||| Sbjct 75520 GCTGAGCATAATATTCTTATGCATCCGTTTCACATGTTAGGTGTAGCTGGTGTATTCGGC 75461 Query 160376 GGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACG 160435 || || || ||| ||||||||| || || |||| ||||||||| | |||| || || Sbjct 75460 GGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACT 75401 Query 160436 ACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGAC 160488 ||||||| ||| || ||| | ||||||| ||||||||||||||||| || Sbjct 75400 ACAGAAAATGAATCTGCGAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 75348 >seq200 Length=959787 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 162283 ATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCT 162342 ||| | || || || || | ||| | |||| ||| || | || | | || || || Sbjct 265389 ATGTTATTTGTCCCAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCC 265330 Query 162343 CTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCTGAA 162402 || || || ||||| || ||||| || ||||| || || || |||||||| ||||||||| Sbjct 265329 CTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAA 265270 Query 162403 TTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTGGCA 162462 ||||| || ||||||||||| ||||| ||||| || |||||| ||||||| ||| |||| Sbjct 265269 TTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGCG 265210 Query 162463 CCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCC 162512 | ||||| || ||||| ||| || ||||||||||||| ||||| || Sbjct 265209 GCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 265160 >seq264 Length=551193 Score = 109 bits (120), Expect = 6e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 160355 GGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACT 160414 ||||| ||||| |||||||| || || || ||| ||||||||| || || |||| ||| Sbjct 291918 GGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACT 291977 Query 160415 TCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGT 160474 |||||| | |||| || || ||||||| ||| || ||| | ||||||| |||||| Sbjct 291978 TCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCGAATGAAGGTTACAGATTCGGT 292037 Query 160475 CAAGAGGAAGAGACTTACAA 160494 ||||||||||| || || || Sbjct 292038 CAAGAGGAAGAAACCTAAAA 292057 >seq1196 Length=183224 Score = 107 bits (118), Expect = 2e-18 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 162157 GCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACT 162216 |||||||| ||| |||||| || | || |||| ||| || ||||| || ||||| || Sbjct 19745 GCAAATACATTCCGTGCTTTTAACCCAACCCAAGCGGAAGAAACTTATTCAATGGTCACC 19686 Query 162217 GCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCAT 162276 || ||||| || ||||| || ||||| || |||||||| ||||| ||||||| ||| Sbjct 19685 GCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAATGTTGGTTACAT 19626 Query 162277 TTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGA 162313 ||||||||| | || || | || | |||| | |||| Sbjct 19625 TTCTTTATGTTATTTGTCCGAGTAACGGGTTTATGGA 19589 >seq177 Length=575278 Score = 107 bits (118), Expect = 2e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 160975 CTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGTGCTTGC 161034 ||||| |||||| ||| || ||||| || ||||| || | |||||| |||| Sbjct 226709 CTTGAACATGCTGAGGAACTTGGAATTGACCTTCCTTACTCATGCAGAGCTGGTTCTTGT 226768 Query 161035 TCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCAATCTTTCCTG 161094 ||| ||||||||||||| ||| | |||| ||| |||| ||| |||||||| Sbjct 226769 TCTTCTTGTGCTGGTAAAGTTGTTAATGGTGGTGTTAATCAGGAAGATGGTTCTTTCCTT 226828 Query 161095 GATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCCCACTTCTGAT 161154 |||||||| ||| ||||| ||| | || || || || |||||||| || || |||||| Sbjct 226829 GATGATGACCAAATTGAAGAAGGTTGGGTTCTTACTTGTGTTGCTTACCCTACATCTGAT 226888 Query 161155 GTAACTATT 161163 || |||||| Sbjct 226889 GTTACTATT 226897 >seq26 Length=132285 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 162387 AGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCT 162446 |||||| ||||||| |||||| || ||||||||||| ||||| ||||| ||||||||| | Sbjct 33083 AGCGGAAGATCCTGGATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTAT 33024 Query 162447 TCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGT 162506 |||||| ||| ||| | |||| || ||||| ||| || | ||||||||||| || Sbjct 33023 TCGTGCGTGGACGGCGGCTCAAGATCTGCCTCATGAAAACCTTATGTTCCCTGAGGAGGT 32964 Query 162507 TCTG 162510 | || Sbjct 32963 TGTG 32960 >seq5156 Length=1562 Score = 104 bits (114), Expect = 3e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 162172 GCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGG 162231 |||||| || | || |||| ||| || ||||| || |||| || || ||||| || ||| Sbjct 933 GCTTTTAACCCAACCCAAGCGGAAGAAACTTATTCAGTGGTCACCGCTAACCGCTTATGG 874 Query 162232 TCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTC 162291 || || |||||||| |||||||| ||||| |||||||| |||||||||||| | || Sbjct 873 TCCCAAATCTTCGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 814 Query 162292 GTTCCCGTCATGGGTCTCTGGA 162313 || || | | |||| | |||| Sbjct 813 GTCCCAATAACGGGTTTATGGA 792 >seq2312 Length=20438 Score = 104 bits (114), Expect = 3e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 162172 GCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGG 162231 |||||| || | || |||| ||| || ||||| || ||||| || || ||||| || ||| Sbjct 19773 GCTTTTAACCCAACCCAAGCGGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGG 19714 Query 162232 TCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTC 162291 || || ||||| || |||||||| ||||| |||||||| |||||||||||| | || Sbjct 19713 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 19654 Query 162292 GTTCCCGTCATGGGTCTCTGGA 162313 || || || | ||| | |||| Sbjct 19653 GTCCCAGTAACAGGTTTATGGA 19632 >seq2286 Length=21248 Score = 104 bits (114), Expect = 3e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 162172 GCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGG 162231 |||||| | | || |||| ||| || ||||| || ||||| || || ||||| || ||| Sbjct 6825 GCTTTTAGCCCAACCCAAGCGGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGG 6766 Query 162232 TCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTC 162291 || || ||||| || |||||||| ||||| |||||||| |||||||||||| | || Sbjct 6765 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 6706 Query 162292 GTTCCCGTCATGGGTCTCTGGA 162313 || || || | |||| | |||| Sbjct 6705 GTCCCAGTAACGGGTTTATGGA 6684 >seq814 Length=198837 Score = 104 bits (114), Expect = 3e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 162172 GCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGG 162231 |||||| || | || ||| ||| || ||||| || ||||| || || ||||| || ||| Sbjct 115047 GCTTTTAACCCAACCCAAACGGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGG 115106 Query 162232 TCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTC 162291 || || ||||| || |||||||| ||||| |||||||| |||||||||||| | || Sbjct 115107 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 115166 Query 162292 GTTCCCGTCATGGGTCTCTGGA 162313 || || || | |||| | |||| Sbjct 115167 GTCCCAGTAACGGGTTTATGGA 115188 >seq1868 Length=44937 Score = 102 bits (112), Expect = 9e-17 Identities = 100/128 (78%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 162172 GCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGG 162231 |||||| || | || |||| ||| || ||||| || ||||| ||||| ||||| || ||| Sbjct 39527 GCTTTTAACCCAACCCAAGCGGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGG 39586 Query 162232 TCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTC 162291 || || ||||| || |||||||| ||||| |||||||| |||||||||||| | || Sbjct 39587 TCCCAAATCTTGGGG-TTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 39645 Query 162292 GTTCCCGT 162299 || || || Sbjct 39646 GTCCCAGT 39653 >seq485 Length=309328 Score = 102 bits (112), Expect = 9e-17 Identities = 90/111 (81%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 162402 ATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTGGC 162461 |||||| || |||||||| || ||||| ||||| || |||||| ||||||||||| |||| Sbjct 82760 ATTTGAGACTTTCTACACAAA-AATATTCTCTTAAACGAAGGTATTCGTGCATGGATGGC 82818 Query 162462 ACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCC 162512 | | ||||| || ||||| ||| || ||||||||||||| ||||| || Sbjct 82819 GACTATAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 82869 >seq318 Length=400206 Score = 100 bits (110), Expect = 3e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 160572 TCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCA 160631 ||||| | |||||||| ||||| || || |||||||| | | | ||| | ||| Sbjct 349093 TCTTCTTAGCTGCTTGACCTGTAGTAGGTATCTGGTTTATCGTGTTAGGTATCAGTACTG 349152 Query 160632 TGGCATTCAATCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAG 160691 |||| |||||| | ||| | || || || ||||| ||| || | || ||||| | | Sbjct 349153 TGGCTTTCAATTTAAATTGATTTAATTTTAACCAATCCGTCGTTGATTCTCAAGGTCGTG 349212 Query 160692 TTCTGAACACTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACG 160751 | | ||||||||||| || ||||||| ||| || || |||||||| ||||| Sbjct 349213 TAATTAACACTTGGGCTGATACTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATA 349272 Query 160752 AGCGTAACGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 160794 | |||||| |||| || || |||| || || ||||| | ||| Sbjct 349273 AACGTAACACTCATAATTTTCCTCCAGAGCTAGCTGCGGTTGA 349315 >seq2162 Length=26882 Score = 98.7 bits (108), Expect = 1e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 162172 GCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGG 162231 |||||| || | || |||| |||||| ||||| || |||| || || ||||| || ||| Sbjct 20864 GCTTTTAACCCAACCCAAGCGGAGGAAACTTATTCATTGGTCACCGCTAACCGCTTTTGG 20923 Query 162232 TCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTC 162291 || || ||||| || |||||||| ||||| ||||||| |||||||||||| | || Sbjct 20924 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGTTATTT 20983 Query 162292 GTTCCCGTCATGGGTCTCTGGA 162313 || || || | ||| | |||| Sbjct 20984 GTCCCAGTAACTGGTTTATGGA 21005 >seq96 Length=755957 Score = 96.9 bits (106), Expect = 4e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 160960 GATGATCAATATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGT 161019 |||||| || || | || || || || | || || ||||| || || || || Sbjct 745892 GATGATGTTTACATCTTAGATGCAGCAGAGAATGCTGGAGTTGAACTCCCTTATTCGTGC 745833 Query 161020 CGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCT 161079 |||||||| || ||||||||||||||||| ||||||| |||| | || ||||| || Sbjct 745832 CGTGCTGGAGCATGCTCTACTTGTGCTGGAAAGATTGTTTCTGGTTCAGTGGATCAGTCC 745773 Query 161080 GATCAATCTTTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCT 161139 ||| || || ||||||| |||||||| | ||| ||||| || ||||| ||| | Sbjct 745772 GATGGCTCGTTTTTGGATGACAATCAACTTAAGGAAGGCTTTGTGCTTACCTGTGTTTCC 745713 Query 161140 TATCCCAC 161147 ||||| || Sbjct 745712 TATCCAAC 745705 >seq2280 Length=21636 Score = 91.5 bits (100), Expect = 2e-13 Identities = 93/120 (78%), Gaps = 1/120 (1%) Strand=Plus/Minus Query 162416 ACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTGGCACCAGTTGATCAAC 162475 ||||||| ||||| ||||| || |||||| ||||||| ||| |||| | ||||| | Sbjct 263 ACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGCGGCTCAAGATCAGC 204 Query 162476 CGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 | ||||| ||| || ||||||||||||| ||||| || | || ||||| || | ||||| Sbjct 203 CTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT-TTAATGG 145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551186988307200