Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq517 93.3 8e-17 seq518 91.5 3e-16 >seq517 Length=283823 Score = 93.3 bits (102), Expect = 8e-17 Identities = 211/309 (68%), Gaps = 9/309 (3%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGAT-TCG 70 |||| |||||||||| | |||| ||| || | ||||| || |||| |||| | || Sbjct 6038 GGGGAGTGAAATAGAACATGAAACCGTAAGC-TCCAAGCAGTGGGAG--GAGTTAAGTCT 5982 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||| |||||||| ||| | |||||||| ||| | | | | || || |||||||| Sbjct 5981 CTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGG 5923 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | ||| ||||| || ||||||||| ||| | ||||| | || || Sbjct 5922 GAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTA 5867 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||| Sbjct 5866 TGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGG 5807 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| |||||||| | |||||| | | ||||||| | | || ||||||||||| || Sbjct 5806 AGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 5747 Query 311 CAATCAAAC 319 || || ||| Sbjct 5746 CACTCGAAC 5738 Score = 91.5 bits (100), Expect = 3e-16 Identities = 210/309 (68%), Gaps = 8/309 (3%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGAT-TCG 70 |||| |||||||||| | |||| ||| || ||||| || |||| |||| | || Sbjct 276070 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAG--GAGTTAAGTCT 276013 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||| |||||||| ||| | |||||||| ||| | | | | || || |||||||| Sbjct 276012 CTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGG 275954 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | ||| ||||| || ||||||||| ||| | ||||| | || || Sbjct 275953 GAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTA 275898 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||| Sbjct 275897 TGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGG 275838 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| |||||||| | |||||| | | ||||||| | | || ||||||||||| || Sbjct 275837 AGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 275778 Query 311 CAATCAAAC 319 || || ||| Sbjct 275777 CACTCGAAC 275769 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251 ||| ||||||| |||||| ||| ||||||||||||| || |||| | |||| Sbjct 94925 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 94866 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 |||||||||| | || | ||| | |||||||| | || ||||||||||||||| Sbjct 94865 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 94806 Query 312 AATCAAACTGGGAAATAGCTCGT 334 || ||| | ||| |||||| || Sbjct 94805 AACCAAGATCGGATATAGCTGGT 94783 >seq518 Length=172489 Score = 91.5 bits (100), Expect = 3e-16 Identities = 210/309 (68%), Gaps = 8/309 (3%) Strand=Plus/Plus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGAT-TCG 70 |||| |||||||||| | |||| ||| || ||||| || |||| |||| | || Sbjct 117525 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAG--GAGTTAAGTCT 117582 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||| |||||||| ||| | |||||||| ||| | | | | || || |||||||| Sbjct 117583 CTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGG 117641 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | ||| ||||| || ||||||||| ||| | ||||| | || || Sbjct 117642 GAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTA 117697 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||| Sbjct 117698 TGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGG 117757 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| |||||||| | |||||| | | ||||||| | | || ||||||||||| || Sbjct 117758 AGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 117817 Query 311 CAATCAAAC 319 || || ||| Sbjct 117818 CACTCGAAC 117826 Score = 91.5 bits (100), Expect = 3e-16 Identities = 210/309 (68%), Gaps = 8/309 (3%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGAT-TCG 70 |||| |||||||||| | |||| ||| || ||||| || |||| |||| | || Sbjct 144757 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAG--GAGTTAAGTCT 144700 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||| |||||||| ||| | |||||||| ||| | | | | || || |||||||| Sbjct 144699 CTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGG 144641 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | ||| ||||| || ||||||||| ||| | ||||| | || || Sbjct 144640 GAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTA 144585 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||| Sbjct 144584 TGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGG 144525 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| |||||||| | |||||| | | ||||||| | | || ||||||||||| || Sbjct 144524 AGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 144465 Query 311 CAATCAAAC 319 || || ||| Sbjct 144464 CACTCGAAC 144456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972794960896