Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12]
518 sequences; 100,688,548 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq518 342 1e-91
seq517 250 5e-64
seq255 91.5 3e-16
seq2 80.6 6e-13
>seq518
Length=172489
Score = 342 bits (378), Expect = 1e-91
Identities = 290/353 (82%), Gaps = 8/353 (2%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 119069 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 119010
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 119009 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 118950
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| || ||||||| || | ||| | | | || | || |
Sbjct 118949 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCG 118890
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 118889 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 118830
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299
|| || ||||||||||||||||||||||||| |||||| || ||||| ||| |
Sbjct 118829 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 118770
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 118769 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 118718
Score = 342 bits (378), Expect = 1e-91
Identities = 290/353 (82%), Gaps = 8/353 (2%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 143213 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 143272
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 143273 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 143332
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| || ||||||| || | ||| | | | || | || |
Sbjct 143333 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCG 143392
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 143393 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 143452
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299
|| || ||||||||||||||||||||||||| |||||| || ||||| ||| |
Sbjct 143453 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 143512
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 143513 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 143564
>seq517
Length=283823
Score = 250 bits (276), Expect = 5e-64
Identities = 281/376 (75%), Gaps = 20/376 (5%)
Strand=Plus/Plus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
||| | |||||||||| | || | ||||||||||| ||| || ||||||| | |
Sbjct 93380 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 93439
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||||||| || ||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 93440 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 93499
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
| |||| |||||| |||||||||||| ||| || |||| || |||||
Sbjct 93500 CAGTTAGAGTTACTGCCGCCGTTTACCAGGGTTTCCATTCAAAGC--------AACTAAC 93551
Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238
| || |||| |||||||||||||||||||| ||||| ||||||||||| || | |
Sbjct 93552 ACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 93611
Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT--G 296
||||||||| ||||||||||| |||||||||||| ||| | | ||| || |
Sbjct 93612 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCA 93671
Query 297 TCATAGACAG--------GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348
||| | || |||||||||||||| ||||||||||||||||||||||| |||
Sbjct 93672 ACATCAAAAGAGTTGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAATTC 93731
Query 349 CTTAACAATAGTTCTC 364
||| || ||||||
Sbjct 93732 CTTCGACATGGTTCTC 93747
>seq255
Length=3424836
Score = 91.5 bits (100), Expect = 3e-16
Identities = 243/368 (66%), Gaps = 65/368 (18%)
Strand=Plus/Minus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
||| | |||||||||| | || | ||||||||||| ||| | ||||
Sbjct 1340437 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCACAT-------CAGT------ 1340391
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
|||||| || ||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 1340390 --CGTTACACCATTCGTGCAGGTCGCCACTTATGCGACAAGGAATTTCGCTACCTTAGGA 1340333
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
|| || | ||| || | || ||| | |||||
Sbjct 1340332 -----AT--------------TTGTCAGGG--TT---TCCA----TTCAAAGCAACTAAC 1340301
Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240
| ||| |||||||||||||||||||| | | ||||||||||| || | |||
Sbjct 1340300 A------CTTGACCTTCCAGCACCGGGCAGGTGAC----TCTATACATCGTGTTACCACT 1340251
Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC----CTG 296
||||||| |||||| |||| || | | | || ||| || || || | |
Sbjct 1340250 TAGCAGAGTCCTGTG--TTTGCTACCCCCTGGTATGTGCCGCTT-TCAACGTCAAAAGAG 1340194
Query 297 TCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAA 356
| | ||| |||||||||||||| ||||||| ||||||||||||||| |||||| |
Sbjct 1340193 TTA-AGA---GCACCCCTTCTCCCCAAGTTAC-GGGTCATTTTGCCGAATTCCTTCGACA 1340139
Query 357 TAGTTCTC 364
| ||||||
Sbjct 1340138 TGGTTCTC 1340131
>seq2
Length=6193689
Score = 80.6 bits (88), Expect = 6e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 52 AGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGC 110
||| |||| | |||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 3879909 AGTCCCCAGAACGTTACAACTTTCGTGCGGGTCGGAGCTTACCCGACAAGGAATTTCGC 3879967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062394496768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |