Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq518 235 1e-59 seq517 167 5e-39 >seq518 Length=172489 Score = 235 bits (260), Expect = 1e-59 Identities = 304/409 (74%), Gaps = 18/409 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 118418 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 118359 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||| | | |||| | | |||||| |||| | || |||||| ||| Sbjct 118358 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 118299 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177 ||||||| || ||| || |||||| | | |||| ||| |||||| || || | | Sbjct 118298 ACATTCTCGCTTCCGCTTCG--TCCACCGC-CGCTCACGCGGGAGCTTC-CCTCTAAGGC 118243 Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231 | ||||||||||||| | | ||| | ||||||||||||| ||| |||| | Sbjct 118242 GGAACGCTCCCCTACCGATGTATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 118187 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| | ||| ||||||| | | || || ||||||||||||||||||||||||||| Sbjct 118186 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 118128 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| | || |||||||||| ||||| ||| | | || |||||| ||||| Sbjct 118127 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTG 118068 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || | || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 118067 AGCGATCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 118019 Score = 235 bits (260), Expect = 1e-59 Identities = 304/409 (74%), Gaps = 18/409 (4%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 143864 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 143923 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||| | | |||| | | |||||| |||| | || |||||| ||| Sbjct 143924 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 143983 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177 ||||||| || ||| || |||||| | | |||| ||| |||||| || || | | Sbjct 143984 ACATTCTCGCTTCCGCTTCG--TCCACCGC-CGCTCACGCGGGAGCTTC-CCTCTAAGGC 144039 Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231 | ||||||||||||| | | ||| | ||||||||||||| ||| |||| | Sbjct 144040 GGAACGCTCCCCTACCGATGTATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 144095 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| | ||| ||||||| | | || || ||||||||||||||||||||||||||| Sbjct 144096 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 144154 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| | || |||||||||| ||||| ||| | | || |||||| ||||| Sbjct 144155 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTG 144214 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || | || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 144215 AGCGATCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 144263 >seq517 Length=283823 Score = 167 bits (184), Expect = 5e-39 Identities = 153/192 (80%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | |||||| |||| || ||| || ||||||| Sbjct 94430 GCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 94486 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 94487 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 94546 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 94547 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 94606 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 94607 GTTTCCCTCTCG 94618 Score = 77.0 bits (84), Expect = 8e-12 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 336 ACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCC 395 || ||||||| ||||||| | || ||||||||||| |||| ||||| |||||||||||| Sbjct 5481 ACCTCCTTTCTCACTGAGCGATCATTTAGGGGCCTTTGCTGGTGATCCGGGCTGTTTCCC 5540 Query 396 TCTCG 400 ||||| Sbjct 5541 TCTCG 5545 Score = 77.0 bits (84), Expect = 8e-12 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 336 ACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCC 395 || ||||||| ||||||| | || ||||||||||| |||| ||||| |||||||||||| Sbjct 275512 ACCTCCTTTCTCACTGAGCGATCATTTAGGGGCCTTTGCTGGTGATCCGGGCTGTTTCCC 275571 Query 396 TCTCG 400 ||||| Sbjct 275572 TCTCG 275576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177593900032