Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04] 200,203 sequences; 414,621,889 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq199139 264 2e-68 seq177271 235 8e-60 seq200031 226 4e-57 seq184452 221 2e-55 seq111387 219 6e-55 seq149216 201 2e-49 seq191775 190 3e-46 seq175741 165 1e-38 seq89404 165 1e-38 seq97523 145 1e-32 seq193254 143 4e-32 seq185858 140 5e-31 seq187335 138 2e-30 seq196062 136 6e-30 seq186642 134 2e-29 seq86128 129 9e-28 seq169758 123 4e-26 seq109307 116 6e-24 seq120437 100 4e-19 seq171844 95.1 2e-17 seq126514 77.0 5e-12 seq145824 73.4 6e-11 >seq199139 Length=1910 Score = 264 bits (292), Expect = 2e-68 Identities = 168/181 (93%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 65 TTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCG 124 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TTTAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCG 60 Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184 ||||| || ||||||| ||| ||||||||||||||||||| |||||||||||||||||| Sbjct 61 GACCTTTCAGCCAAGGCTATAAACTCGTTGAATACATCAGT-TAGCGCGCGTGCGGCCCA 119 Query 185 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCA 244 |||||||||| ||||||||| || |||||||||||||||||||| |||||| |||| ||| Sbjct 120 GAACATCTAACGGCATCACAAACATGTTATTGCCTCAAACTTCCATGGCCTGAAAGACCA 179 Query 245 T 245 | Sbjct 180 T 180 >seq177271 Length=5127 Score = 235 bits (260), Expect = 8e-60 Identities = 146/154 (95%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 10 GCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAA 69 |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| || Sbjct 5127 GCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-CCTCGTTTAA 5070 Query 70 GACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCT 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5069 GACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCT 5010 Query 130 GTCGGCCAAGGTGATAGACTCGTTGAATACATCA 163 || ||||||| ||| ||||||||||||||||| Sbjct 5009 TTCAGCCAAGGCTATAAACTCGTTGAATACATCA 4976 >seq200031 Length=10744 Score = 226 bits (250), Expect = 4e-57 Identities = 162/185 (88%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 72 CCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGT 131 ||||||| |||||||||| ||||||||||| ||||||||||||||||||||| |||| | Sbjct 6836 CCAACAAATGCAATGATCGATCCCCATCACAATGAAATTTCAAAGATTACCCATACCTTT 6777 Query 132 CGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATC 191 | ||||||| || | | ||||||| |||||||||||||||||||||| |||||||||| Sbjct 6776 CAGCCAAGGCTATCGCATTGTTGAATGCATCAGTGTAGCGCGCGTGCGGTCCAGAACATC 6717 Query 192 TAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTCCC 250 ||||||||||||| |||| |||||||| |||| |||||||| |||||||||||| |||| Sbjct 6716 TAAGGGCATCACAAACCTATTATTGCCCCAAATTTCCGTGGACTAAAAGGCCATATTCCC 6657 Query 251 TCGAA 255 || || Sbjct 6656 TCTAA 6652 >seq184452 Length=6451 Score = 221 bits (244), Expect = 2e-55 Identities = 162/186 (87%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||| ||||| | |||| | |||| |||| |||||||||||||| |||| | Sbjct 6280 GTACAAAGGGCAGTGACGTCGCCAACACAAGCT-GATGGCTCGCGCTTACTAGAAATT-C 6223 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 || |||||||||||||||||||||||||| |||||||||| |||||||||||||| |||| Sbjct 6222 CTTGTTGAAGACCAACAATTGCAATGATCCATCCCCATCATGATGAAATTTCAAACATTA 6163 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||||||| || ||||||| ||| |||| |||||| |||||||||||||||| ||| Sbjct 6162 CCCGGACCTTTCAGCCAAGGCTATAAACTCATTGAATTCATCAGTGTAGCGCGCATGCAT 6103 Query 181 CCCAGA 186 | |||| Sbjct 6102 CACAGA 6097 >seq111387 Length=1287 Score = 219 bits (242), Expect = 6e-55 Identities = 133/138 (96%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 1152 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 1209 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1210 CTCGTTTAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 1269 Query 121 CCCGGACCTGTCGGCCAA 138 ||||||||| || ||||| Sbjct 1270 CCCGGACCTTTCAGCCAA 1287 >seq149216 Length=2654 Score = 201 bits (222), Expect = 2e-49 Identities = 136/151 (90%), Gaps = 6/151 (4%) Strand=Plus/Plus Query 106 AAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGT 165 |||||||||||||||| ||| | ||| |||| ||| ||||||||||||||||||| Sbjct 2480 AAATTTCAAAGATTACACGGGC-----GGCTAAGGCTATAAACTCGTTGAATACATCAGT 2534 Query 166 GTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2535 GTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 2594 Query 226 TCCGTGGCCTAAAAGGCCAT-CTCCCTCGAA 255 |||||||||| ||||||||| |||||| || Sbjct 2595 TCCGTGGCCTGAAAGGCCATAGTCCCTCTAA 2625 >seq191775 Length=8922 Score = 190 bits (210), Expect = 3e-46 Identities = 114/117 (97%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 8808 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 8865 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA 117 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8866 CTCGTTTAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA 8922 >seq175741 Length=4904 Score = 165 bits (182), Expect = 1e-38 Identities = 100/103 (97%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 101 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 44 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 |||||| |||||||||||||||||||||||||||||||||||| Sbjct 43 CTCGTTTAAGACCAACAATTGCAATGATCTATCCCCATCACGA 1 >seq89404 Length=849 Score = 165 bits (182), Expect = 1e-38 Identities = 102/109 (94%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 137 AAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGG 196 |||| ||| ||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct 1 AAGGCTATAAACTCGTTGAATACATCAGTGTAGCGCGCGTGTGGCCTAGAACATCTAAGG 60 Query 197 GCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT 245 |||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 61 GCATCACAGACCTGTTATTGCCTCAAACTTTCGTGGCCTGAAAGGCCAT 109 >seq97523 Length=990 Score = 145 bits (160), Expect = 1e-32 Identities = 103/118 (87%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 97 ATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAA 156 |||||||||||||||||||||||||||| |||| || ||||||| ||| | |||||||| Sbjct 990 ATCACGATGAAATTTCAAAGATTACCCGAACCTTTCAGCCAAGGCTATAAATTCGTTGAA 931 Query 157 TACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTAT 214 ||||| |||||||| |||||||||||| |||||||| ||| |||||| |||| |||| Sbjct 930 TACATAAGTGTAGCACGCGTGCGGCCCCAAACATCTATGGGAATCACAAACCTATTAT 873 >seq193254 Length=9810 Score = 143 bits (158), Expect = 4e-32 Identities = 108/123 (88%), Gaps = 3/123 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| ||| || ||||||||| ||||| ||||||| |||||||||| | ||| | Sbjct 993 GTACAAAGGACAGAGATGTAGTCAACATGAGCT-GATGACT-GCGCTTACTATGGATT-C 1049 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct 1050 CTCGTTTAAGACCAACAATTACAATGATCTATCCCTATCACAATGAAATTTCAAAGATTA 1109 Query 121 CCC 123 || Sbjct 1110 ACC 1112 >seq185858 Length=6796 Score = 140 bits (154), Expect = 5e-31 Identities = 98/112 (88%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 134 GCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA 193 |||||| ||| |||||||||||||||||||||| ||| ||| |||||||||||||| Sbjct 1188 GCCAAGACTATAAACTCGTTGAATACATCAGTGTATTTCGCATGCAGCCCAGAACATCTA 1129 Query 194 AGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT 245 ||||||| ||| ||||||||||||||||||||| | |||||| ||||||||| Sbjct 1128 AGGGCATTACAAACCTGTTATTGCCTCAAACTTTCATGGCCTGAAAGGCCAT 1077 >seq187335 Length=7224 Score = 138 bits (152), Expect = 2e-30 Identities = 115/139 (83%), Gaps = 9/139 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| ||||| |||||||| | ||||| |||||| | ||||||||| |||| | Sbjct 4992 GTACAAAGGGTAGGGAAGTAGTCAATGTGAGCTA-ATGACTGGTGCTTACTAGAAATT-C 4935 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 4934 CTCGTT-------AACAATTGCAATGATCTATCCCCATCAAGATGAAATTTCAAAGATTA 4882 Query 121 CCCGGACCTGTCGGCCAAG 139 ||| | || || | |||| Sbjct 4881 CCCAAATCTTTCAGTCAAG 4863 >seq196062 Length=13094 Score = 136 bits (150), Expect = 6e-30 Identities = 148/193 (77%), Gaps = 9/193 (5%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||| ||||| || ||||| | || | ||||||||| Sbjct 10644 GTACAAAGGGCAGGGACGTATTCAACTCGAGCA-GACGACTCACACTCATAAGGAATTTC 10586 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 | |||||||||| |||| |||| |||||||||||||| |||| |||||||||| ||| Sbjct 10585 TTA-TTGAAGACCAGCAATAGCAAAGATCTATCCCCATCGTGATGGAATTTCAAAGGTTA 10527 Query 121 CCCGGACCTGTCGGCCAAGGT------GATAGACTCGTTGAATACATCAGTGTAGCGCGC 174 || | |||||| || | | | ||| ||||| |||||| |||| ||||| | Sbjct 10526 CCTAGGCCTGTCCGCAAGGCTATAAAGTATAAACTCGGTGAATA-TTCAGAGTAGCATCC 10468 Query 175 GTGCGGCCCAGAA 187 | ||||| || || Sbjct 10467 GCGCGGCACACAA 10455 >seq186642 Length=7014 Score = 134 bits (148), Expect = 2e-29 Identities = 83/86 (97%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 6931 GTACAAAGGGCAGGGACGTAGTCAACGCGAGC-TGATGACTCGCGCTTACTAGGAA-TTC 6988 Query 61 CTCGTTGAAGACCAACAATTGCAATG 86 |||||| ||||||||||||||||||| Sbjct 6989 CTCGTTTAAGACCAACAATTGCAATG 7014 >seq86128 Length=798 Score = 129 bits (142), Expect = 9e-28 Identities = 98/116 (84%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184 ||||| || ||||||| ||| ||| ||||||||||||||||||| | | | | | |||| Sbjct 230 GACCTTTCAGCCAAGGCCATAAACTAGTTGAATACATCAGTGTAGTGAGTGAGTGACCCA 171 Query 185 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 ||||||||||||||||||||||| |||||||||||||||||| || | | ||||| Sbjct 170 GAACATCTAAGGGCATCACAGACTTGTTATTGCCTCAAACTTTCGCCGACCAAAAG 115 >seq169758 Length=4193 Score = 123 bits (136), Expect = 4e-26 Identities = 70/71 (99%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 159 CATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 50 CATCAGTGTAGCGCGCGTGCGGCCCAGAATATCTAAGGGCATCACAGACCTGTTATTGCC 109 Query 219 TCAAACTTCCG 229 ||||||||||| Sbjct 110 TCAAACTTCCG 120 >seq109307 Length=1237 Score = 116 bits (128), Expect = 6e-24 Identities = 85/96 (89%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 20 AGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAAT 79 |||||| || |||| ||||||| || ||||||||||||| ||| || |||||||||||| Sbjct 1204 AGTCAATGCAAGCT-GATGACTTGCACTTACTAGGAATT-CCTTTTTTAAGACCAACAAT 1147 Query 80 TGCAATGATCTATCCCCATCACGATGAAATTTCAAA 115 ||||||||| ||||||||||| |||||||||||||| Sbjct 1146 TGCAATGATTTATCCCCATCATGATGAAATTTCAAA 1111 >seq120437 Length=1527 Score = 100 bits (110), Expect = 4e-19 Identities = 67/74 (91%), Gaps = 2/74 (3%) Strand=Plus/Minus Query 131 TCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACAT 190 || ||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||| Sbjct 1526 TCAGCCAAGGCTATAAACTCGTTGAATACATCAGTGTAGCGCGC--GCGGCCCATAACAT 1469 Query 191 CTAAGGGCATCACA 204 |||||||||||||| Sbjct 1468 CTAAGGGCATCACA 1455 >seq171844 Length=4421 Score = 95.1 bits (104), Expect = 2e-17 Identities = 70/79 (89%), Gaps = 2/79 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||| |||||||||||||||||| ||||||||| |||||||||| ||||| || ||| ||| Sbjct 498 GTATAAAGGGCAGGGACGTAGTTAACGCGAGC-TGATGACTCGTGCTTATTAAGAA-TTC 555 Query 61 CTCGTTGAAGACCAACAAT 79 ||| || |||||||||||| Sbjct 556 CTCATTTAAGACCAACAAT 574 >seq126514 Length=1715 Score = 77.0 bits (84), Expect = 5e-12 Identities = 60/69 (87%), Gaps = 2/69 (3%) Strand=Plus/Plus Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236 |||||| |||||||||||||| || |||||||| ||||||||||||||||| | ||| Sbjct 1579 GCGGCCTAGAACATCTAAGGGTATAACAGACCT-ATATTGCCTCAAACTTCC-TTCCCTG 1636 Query 237 AAAGGCCAT 245 ||||||||| Sbjct 1637 AAAGGCCAT 1645 >seq145824 Length=2480 Score = 73.4 bits (80), Expect = 6e-11 Identities = 49/55 (89%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 114 AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTA 168 ||||||||||||| || || ||||||| ||| |||||||||||||||||||||| Sbjct 55 AAGATTACCCGGAACTTTCAGCCAAGGCTATAAACTCGTTGAATACATCAGTGTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750541521145