Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04] 200,203 sequences; 414,621,889 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq199398 266 7e-69 seq198221 244 2e-62 seq198403 224 2e-56 seq197877 187 5e-45 seq197926 147 5e-33 seq200113 138 2e-30 seq191682 138 2e-30 seq199933 132 1e-28 seq197983 129 1e-27 seq198489 114 3e-23 seq197774 111 3e-22 seq191388 107 4e-21 seq192117 102 2e-19 seq188278 87.8 4e-15 seq198947 73.4 8e-11 >seq199398 Length=3331 Score = 266 bits (294), Expect = 7e-69 Identities = 286/377 (76%), Gaps = 21/377 (6%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||||||| ||| || ||||||| | | Sbjct 990 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 1049 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 1050 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 1109 Query 121 CCGTTATAGTTACGGCCGCCGTTTA-CTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAA 179 | |||| |||||| ||||||||||| | ||||||| |||| ||| | ||| Sbjct 1110 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGGCTTCCATTCAAAGCT--------TATAA 1161 Query 180 CAGATCCCCTTA--ACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCG 237 || || ||||| ||| |||||||||||||||| ||||| ||||||||||| || | Sbjct 1162 CACTTCTCCTTACGACCCTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACC 1221 Query 238 ACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGT 297 |||||||||| ||||||||||| |||||||||||| ||| | | ||| || | Sbjct 1222 ACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTC 1281 Query 298 C------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTT 347 | | ||| || |||||||||||||| |||||||||||||||||||||||||| Sbjct 1282 CTAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTT 1341 Query 348 CCTTAACAATAGTTCTC 364 |||| || |||||| Sbjct 1342 CCTTCGACATGGTTCTC 1358 >seq198221 Length=3577 Score = 244 bits (270), Expect = 2e-62 Identities = 231/293 (79%), Gaps = 4/293 (1%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||| || || ||||||||||||| |||||| Sbjct 8 GCATCTTCACAGACATGTCTCTTTCACCGAGCCTCTTTACGAGACAGTGCCCAGATCGTT 67 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || ||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| Sbjct 68 ACACCTTTCGTGTTGGTCAGAACTTACCCGACAATAAATTTCGCTACCTTAGGACCGTTA 127 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 128 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 187 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||| ||||| || ||||| ||||| |||||| Sbjct 188 ACTTCCTTGACCTTCCGGCACTGGGCAGGCATCAGCCCCCGTACATGGTCTTACGACTTT 247 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT 295 ||||| |||||||| |||||||||||||||| || ||| || ||| | ||| Sbjct 248 GCAGAGACCTGTGTGTTTGGTAAACAGTCGCCCGGACCTGGTCACTGTGACCT 300 >seq198403 Length=5490 Score = 224 bits (248), Expect = 2e-56 Identities = 227/294 (77%), Gaps = 10/294 (3%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | |||||||||||| | |||||| Sbjct 1667 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCTGAGACAGTGCCGAGATCGTT 1608 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 | |||||||||| |||| |||||||| |||||| |||||||||||||||||||| |||| Sbjct 1607 ATGCCTTTCGTGTTGGTCAGAACTTACTCGACAATGAATTTCGCTACCTTAGGACGGTTA 1548 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCT-TCG-----ATTGCTCTAAC 180 |||||||||||| ||| || ||||||| ||| | ||| ||| | | | ||| Sbjct 1547 TAGTTACGGCCGTTGTTCACCGGGGCTTCGGTTGCCGGCTCTCGTCATCAGGTCACCAAC 1488 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 || ||| |||||||||||| |||||||| || || | || || ||||| ||||| Sbjct 1487 AG----TCTTGACCTTCCAGCACTGGGCAGGCATCGGCCTCCGTATATGGTCTTACGACT 1432 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC 294 | || || |||||||||||||||||| ||||||| || || || ||||| || Sbjct 1431 TTGCGGAGACCTGTGTTTTTGGTAAATAGTCGCTCAGGACTGGTCACTGCGACC 1378 >seq197877 Length=1212 Score = 187 bits (206), Expect = 5e-45 Identities = 130/148 (88%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 1065 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 1124 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1125 ACGCCTTTCGTGCTGGTCGGAACTTACCCGACAATAAATTTCGCTACCTTAGGACCGTTA 1184 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTT 154 ||||||||||||||||| || ||||||| Sbjct 1185 TAGTTACGGCCGCCGTTCACCGGGGCTT 1212 >seq197926 Length=1467 Score = 147 bits (162), Expect = 5e-33 Identities = 89/94 (95%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 1465 ATCGTTACGCCTTTCGTGCTGGTCGGAACTTACCCGACAATAAATTTCGCTACCTTAGGA 1406 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 ||||||||||||||||||||||| || ||||||| Sbjct 1405 CCGTTATAGTTACGGCCGCCGTTCACCGGGGCTT 1372 >seq200113 Length=13203 Score = 138 bits (152), Expect = 2e-30 Identities = 141/184 (77%), Gaps = 10/184 (5%) Strand=Plus/Plus Query 191 AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAAC 250 |||| |||||||||||||||| ||||| ||||||||||| |||| |||||||||| | Sbjct 9353 AACCCTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTGCCACTTAGCAGAGTC 9412 Query 251 CTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC------ATAGAC 304 |||| ||||| |||| ||| ||| |||| | | ||| || | | | ||| Sbjct 9413 CTGTATTTTTAATAAATAGTTGCTATCACCTAGTATGTGCCGCTTTCCTAATCAAAAGAT 9472 Query 305 AG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGT 360 || ||| |||||||||| |||||||||||||||||| |||||||||||| ||||| Sbjct 9473 AGGAGAGCATCCCTTCTCCCGAAGTTACGGGGTCATTTTCCCGAGTTCCTTAGACATAGT 9532 Query 361 TCTC 364 |||| Sbjct 9533 TCTC 9536 >seq191682 Length=8879 Score = 138 bits (152), Expect = 2e-30 Identities = 251/359 (70%), Gaps = 25/359 (7%) Strand=Plus/Minus Query 8 CATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTA 67 ||||||||| | || | |||||||||| ||| || | ||||||||| | | ||| Sbjct 6341 CATCTTCACAGAGAATTCAATTTCACCAGGTCCATGTTGGAGACAGTGGGGTAGTTGTTT 6282 Query 68 CGCCTTTCGTGCGGGTCGGAACTT-ACCCGACAA-GGAATTTCGCTACCTTAGGACCGTT 125 | || ||||||| ||||| ||| | |||| | |||||||||||| ||||||| ||| Sbjct 6281 CACCATTCGTGCAGGTCGCTGCTTTATGCGACTACGGAATTTCGCTAACTTAGGATAGTT 6222 Query 126 ATAGTTACGGCCGCCGTTTA-CTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184 | |||||| ||| || |||| ||||||||| |||| | | || || | | Sbjct 6221 AGAGTTACAGCCACCATTTACCTGGGGCTTCCCTTCAAAGTT---AT-----AAAAACTT 6170 Query 185 CCCCTTA--ACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | || || | | ||||||||||||| || ||||| |||||||||| || | | ||| Sbjct 6169 CTCCCTACGATCCTCCAGCACCGGGCTGGTGTCAGACTTTATACATCGTATTACCAGTTA 6110 Query 243 GCAGAAACCTG-TGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC--- 298 ||| || ||| |||||| |||| ||| || | || | | | ||| | | | Sbjct 6109 GCA-AAGTCTGACGTTTTTAATAAATAGTAGC-TACCCCAAGTGTGTGCCACTTTCCTAA 6052 Query 299 ------ATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 ||||| |||||||| ||||| || |||| |||||||||||||||||||||| Sbjct 6051 TCAAAAATAGAAGAGCACCCCTCCTCCCGAATTTACAGGGTCATTTTGCCGAGTTCCTT 5993 >seq199933 Length=8665 Score = 132 bits (146), Expect = 1e-28 Identities = 184/255 (72%), Gaps = 16/255 (6%) Strand=Plus/Plus Query 25 CAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTC 84 ||||||||| | ||| || | |||||| | || ||||||| || ||||| |||| Sbjct 7638 CAATTTCACTGGGTCCATATTAGAGACAACGGGCAG-TCGTTACACCATTCGTAAAGGTC 7696 Query 85 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTT 144 ||||| | ||||||||||||||||||||||||| |||| |||||| ||| |||||| Sbjct 7697 TCTACTTATGCAACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCACCGTTT 7756 Query 145 A-CTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCCTTA--ACCTTCCAGC 201 | | ||||||| |||| ||| | ||||| || ||||| ||| |||||| Sbjct 7757 ACCGGGGGCTTCCATTCAACGCT--------TATAACACTTCTCCTTACGACCCTCCAGC 7808 Query 202 ACCGGGCAGGCGTCAGCT----CCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTT 257 | |||| | ||||| | ||||||||| | || | |||||| ||| | ||| || Sbjct 7809 ATTGGGCGTGTGTCAGATTCTAGCTATACATCATGTTACCACTTAGTAGAGTCATGTATT 7868 Query 258 TTTGGTAAACAGTCG 272 ||| |||||||||| Sbjct 7869 TTTTATAAACAGTCG 7883 >seq197983 Length=1807 Score = 129 bits (142), Expect = 1e-27 Identities = 92/106 (87%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 1123 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 1182 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTA 112 ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1183 ACGCCTTTCGTGCTGGTCGGAACTTACCCGACAAGGAATTTCGCTA 1228 >seq198489 Length=6656 Score = 114 bits (126), Expect = 3e-23 Identities = 90/108 (83%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||| |||| |||||||| ||||| || ||||| ||||| |||||| || | Sbjct 114 CCTTGACCTTCCGGCACTGGGCAGGCATCAGCCCCCGTACATGGTCTTACGACTTTGCGG 55 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC 294 | ||||||||||||||||||||||||| |||||| || ||||| || Sbjct 54 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC 7 >seq197774 Length=679 Score = 111 bits (122), Expect = 3e-22 Identities = 117/152 (77%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGC-TC- 176 ||||||||||||||||||||||||| || ||||||| || | ||| | | | || Sbjct 528 GACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCA 587 Query 177 --TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTT 234 | || | |||| ||||||| |||| |||||||| ||||| || ||||| ||||| Sbjct 588 GGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCATCAGCCCCCGTACATGGTCTT 647 Query 235 GCGACTTAGCAGAAACCTGTGTTTTTGGTAAA 266 |||||| || || |||||||||||||||||| Sbjct 648 ACGACTTTGCGGAGACCTGTGTTTTTGGTAAA 679 >seq191388 Length=8740 Score = 107 bits (118), Expect = 4e-21 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | ||||||||| | | | ||||||||||| ||| | ||||||| | Sbjct 4994 TACTCCGCATCTTCAAGGACAATTCAATTTCACCGGGTCCAAGTCCGAGACAGCAGGGCA 4935 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 4934 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 4875 Query 121 CCGTTATAGTTACGGCCGC 139 | |||||||||| ||||| Sbjct 4874 CAGTTATAGTTATTGCCGC 4856 >seq192117 Length=9109 Score = 102 bits (112), Expect = 2e-19 Identities = 128/171 (75%), Gaps = 11/171 (6%) Strand=Plus/Minus Query 102 GAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA 161 ||||||||||||||||||||||| |||||| |||||| ||| | |||||| | Sbjct 4751 GAATTTCGCTACCTTAGGACCGT---AGTTACTGCCGCCATTTGCCAGGGCTTCAAC--- 4698 Query 162 CTGCT-TCGATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTC 220 ||||| || | | || || || ||| ||||||| |||| || ||||| |||| || Sbjct 4697 CTGCTGTCTA--GGTC--ACCAATTTACTTGACCTTCCGGCACTGGACAGGCATCAGGTC 4642 Query 221 CTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTC 271 | ||||| |||| ||||| || || ||||||||||||| ||||| ||| Sbjct 4641 CCGTACATGGTCTGATGACTTTGCGGATACCTGTGTTTTTGTTAAACTGTC 4591 >seq188278 Length=7524 Score = 87.8 bits (96), Expect = 4e-15 Identities = 112/153 (73%), Gaps = 10/153 (7%) Strand=Plus/Minus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| | ||||| | ||| |||| ||||| || |||| ||||| |||| | |||| Sbjct 2622 CCTTGAGGTTCCACCGGTGGGTAGGCATCAGCCCCCGTACAAGGTCTTACGACATCGCAG 2563 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCT------GT 297 | |||||||||||||||||| ||| || | |||||| || ||||| ||| | Sbjct 2562 AGACCTGTGTTTTTGGTAAATAGTTGCCT-GGCCTACTCGCTGCGAATCCCTCACGAAGG 2504 Query 298 CATAGACAGGCACCCCTTCTCCCTAAGTTACGG 330 || | ||||||||||||||| ||||||||| Sbjct 2503 GTGAGGCGGGCACCCCTTCTCCCAAAGTTACGG 2471 >seq198947 Length=908 Score = 73.4 bits (80), Expect = 8e-11 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 307 GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 |||||||||||||| ||||||||||||||||||| |||||||||| || |||||| Sbjct 485 GCACCCCTTCTCCCAAAGTTACGGGGTCATTTTGTCGAGTTCCTTGGACATGGTTCTC 428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1060273043328