Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04] 200,203 sequences; 414,621,889 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq155723 116 7e-24 >seq155723 Length=3040 Score = 116 bits (128), Expect = 7e-24 Identities = 154/212 (73%), Gaps = 5/212 (2%) Strand=Plus/Plus Query 68 CGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCTTGGTTAC 127 ||||||| ||| ||||| || || || || ||| | |||| | |||| ||||| || Sbjct 1175 CGACCCGTTCGTTCGGGTCGGGGCGTGTGGAGTCGATTTGGGTGGTTGGACTTTGGTAAC 1234 Query 128 CGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACAAAAAGGA 187 |||||||| || || || | || || ||||| | | | || | | || |||| Sbjct 1235 CGGGTCGGAATACCAGGGTGGGCCTCACGGGTTTTACCTGGT---TGAAGGGAAGAAGGG 1291 Query 188 TGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTTGTGCA 247 ||||| || ||||||||| ||||| || || ||||| || ||||||||||||||||| Sbjct 1292 AGGGCAGAAAGGTAAATTGAGGAAGATAGAAGTGCCTGAGGAGTTTTCTGGATTTGTGCA 1351 Query 248 ATCTGGATGCTGTGTGGAGATCTGAAATTTTG 279 ||| | |||||||| || ||||| |||||| Sbjct 1352 ATCGAGTTGCTGTGTTGAAATCTG--ATTTTG 1381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 916561335648