Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq17439 127 4e-27 seq143 78.8 2e-12 seq142 78.8 2e-12 >seq17439 Length=278 Score = 127 bits (140), Expect = 4e-27 Identities = 144/192 (75%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 144 TAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTA-GACGCGAAAC 202 ||| || || ||||||||| | || || ||| |||| || || | ||| |||||| Sbjct 56 TAGGCGTAGCGAAAGCGAGTTTGAATAGAGCGTTAAGTTCGTTGCATGACGACCCGAAAC 115 Query 203 CTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCG 262 |||||||| ||| ||||||| ||||| |||||| | |||||| ||||||| Sbjct 116 TAGGTGATCTATCCATGAGCAGGATGAAGGTTGGGTAACACCAACTGGAGGTCCGAACCC 175 Query 263 GTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGG 322 || || |||||||| || | |||||||| | || ||||||||||||||||||||||| Sbjct 176 GTGAATGTTGAAAAATTCTGGGATGACTTGTGGATAGGGGTGAAAGGCCAATCAAACCTA 235 Query 323 GAAATAGCTCGT 334 || |||||| || Sbjct 236 GACATAGCTGGT 247 >seq143 Length=3452 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251 ||| ||||||| |||||| ||| ||||||||||||| || |||| | |||| Sbjct 2579 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 2520 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 |||||||||| | || | ||| | |||||||| | || ||||||||||||||| Sbjct 2519 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 2460 Query 312 AATCAAACTGGGAAATAGCTCGT 334 || ||| | ||| |||||| || Sbjct 2459 AACCAAGATCGGATATAGCTGGT 2437 >seq142 Length=3451 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251 ||| ||||||| |||||| ||| ||||||||||||| || |||| | |||| Sbjct 2578 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 2519 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 |||||||||| | || | ||| | |||||||| | || ||||||||||||||| Sbjct 2518 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 2459 Query 312 AATCAAACTGGGAAATAGCTCGT 334 || ||| | ||| |||||| || Sbjct 2458 AACCAAGATCGGATATAGCTGGT 2436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972073717248