Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq146 156 6e-36 seq145 156 6e-36 seq143 156 6e-36 seq142 156 6e-36 seq141 156 6e-36 seq139 156 6e-36 seq144 150 2e-34 seq140 150 2e-34 seq69649 123 3e-26 seq5757 105 9e-21 >seq146 Length=3452 Score = 156 bits (172), Expect = 6e-36 Identities = 182/243 (75%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 1265 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 1323 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | || | |||| | Sbjct 1324 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTCCCTAA--TCAAAAGA 1381 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 1382 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 1432 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| |||||| || ||||||||||||||| | Sbjct 1433 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 1492 Query 246 GTA 248 ||| Sbjct 1493 GTA 1495 >seq145 Length=3426 Score = 156 bits (172), Expect = 6e-36 Identities = 182/243 (75%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 1265 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 1323 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | || | |||| | Sbjct 1324 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTCCCTAA--TCAAAAGA 1381 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 1382 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 1432 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| |||||| || ||||||||||||||| | Sbjct 1433 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 1492 Query 246 GTA 248 ||| Sbjct 1493 GTA 1495 >seq143 Length=3452 Score = 156 bits (172), Expect = 6e-36 Identities = 182/243 (75%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 1266 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 1324 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | || | |||| | Sbjct 1325 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTCCCTAA--TCAAAAGA 1382 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 1383 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 1433 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| |||||| || ||||||||||||||| | Sbjct 1434 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 1493 Query 246 GTA 248 ||| Sbjct 1494 GTA 1496 >seq142 Length=3451 Score = 156 bits (172), Expect = 6e-36 Identities = 182/243 (75%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 1265 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 1323 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | || | |||| | Sbjct 1324 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTCCCTAA--TCAAAAGA 1381 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 1382 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 1432 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| |||||| || ||||||||||||||| | Sbjct 1433 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 1492 Query 246 GTA 248 ||| Sbjct 1493 GTA 1495 >seq141 Length=3427 Score = 156 bits (172), Expect = 6e-36 Identities = 182/243 (75%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 1266 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 1324 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | || | |||| | Sbjct 1325 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTCCCTAA--TCAAAAGA 1382 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 1383 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 1433 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| |||||| || ||||||||||||||| | Sbjct 1434 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 1493 Query 246 GTA 248 ||| Sbjct 1494 GTA 1496 >seq139 Length=3453 Score = 156 bits (172), Expect = 6e-36 Identities = 182/243 (75%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 1266 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 1324 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | || | |||| | Sbjct 1325 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTCCCTAA--TCAAAAGA 1382 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 1383 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 1433 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| |||||| || ||||||||||||||| | Sbjct 1434 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 1493 Query 246 GTA 248 ||| Sbjct 1494 GTA 1496 >seq144 Length=3321 Score = 150 bits (166), Expect = 2e-34 Identities = 182/248 (73%), Gaps = 20/248 (8%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || Sbjct 1270 CTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGG 1328 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||| |||||||||||| ||| || |||||||| || Sbjct 1329 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTAGTCACTGCGACCCCCT-------- 1380 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | || || || ||||||||||||||||||||| ||||| |||||||||| Sbjct 1381 -----TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTATGGGGCTATTTTGCCGAG 1429 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| | |||| | || | ||| ||||||||||||| |||||||||||||| Sbjct 1430 TTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGT 1489 Query 241 TTACGGTA 248 || ||||| Sbjct 1490 TTCCGGTA 1497 >seq140 Length=3295 Score = 150 bits (166), Expect = 2e-34 Identities = 182/248 (73%), Gaps = 20/248 (8%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || Sbjct 1270 CTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGG 1328 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||| |||||||||||| ||| || |||||||| || Sbjct 1329 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTAGTCACTGCGACCCCCT-------- 1380 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | || || || ||||||||||||||||||||| ||||| |||||||||| Sbjct 1381 -----TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTATGGGGCTATTTTGCCGAG 1429 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| | |||| | || | ||| ||||||||||||| |||||||||||||| Sbjct 1430 TTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGT 1489 Query 241 TTACGGTA 248 || ||||| Sbjct 1490 TTCCGGTA 1497 >seq69649 Length=262 Score = 123 bits (136), Expect = 3e-26 Identities = 95/113 (84%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 130 TCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAAC 189 |||||| || || | ||||||||||||||||||| ||||||||||| | |||||| || Sbjct 195 TCACCAAAAGCGGTGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCAC 136 Query 190 CACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 | ||||| | | | |||||| ||||||||||||||| ||||||||||||||| Sbjct 135 CCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTGATCACCTGTGTCGGTTT 83 >seq5757 Length=360 Score = 105 bits (116), Expect = 9e-21 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 148 CTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAACGC 207 ||||| ||||||||||| | || |||||||| |||||| | || ||||| | | | ||| Sbjct 293 CTTCTTCCGAAGTTACGCGTGCAATTTGCCGAGTTCCTTCAACATAGTTCTCTCAAGCGC 234 Query 208 CTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 ||| |||| |||||||||||||||||||||||||| |||| Sbjct 233 CTTGGTATACTCTACCTGACCACCTGTGTCGGTTTCGGGTA 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693897768907