Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq49874 363 4e-98 seq146 237 4e-60 seq144 237 4e-60 seq139 237 4e-60 seq145 214 4e-53 seq141 214 4e-53 seq140 214 4e-53 seq17439 122 2e-25 seq143 102 2e-19 seq142 102 2e-19 >seq49874 Length=332 Score = 363 bits (402), Expect = 4e-98 Identities = 248/275 (90%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 146 AGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCG 205 ||||||||||| ||||||| ||||||||| ||||||| ||| |||||||| ||||||||| Sbjct 1 AGACTCGCTTT-CGCTACGGCTCCCCTATACGGTTAACCTT-GCCACTGACAATAAGTCG 58 Query 206 CTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTAC 265 ||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||| Sbjct 59 CTGACCCATTATACAAAAGGTACGCAGTCACAGAACAA-GTCTGCTCCTACTGCTTGTAC 117 Query 266 GCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCA 325 ||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct 118 GCACACGGTTTCAGGATCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCCTTTCCCTCA 177 Query 326 CGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCAT 385 ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 178 CGGTACTGGTTCACTATCGGTCAGTTGGGAGTATTTAGCCTTGGAGGATGGTCCCCCCAT 237 Query 386 ATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||||| ||| | || |||| |||||||||||| Sbjct 238 ATTCAAACAGGATATCACGTGTCCCGTCCTACTCG 272 >seq146 Length=3452 Score = 237 bits (262), Expect = 4e-60 Identities = 311/414 (75%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | ||||||||| ||||||||||| |||| | ||||| | Sbjct 2480 CCACAACTCAT-CCGCTGA-TTTTTCAACATCAGTCGGTTCGGACCTCGACTTAGTT-TC 2536 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 2537 ACCTAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 2592 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | | |||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 2593 GACAATA-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 2650 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 2651 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCCTCAGC 2709 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | ||||||||||||||| | | ||||| Sbjct 2710 TC-CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGC-CGGGGGT 2767 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||| Sbjct 2768 TCTTTTCACCTTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCT 2827 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || |||| ||||| || | ||||||| Sbjct 2828 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTTCACGTGCCCCATGCTACTCG 2881 >seq144 Length=3321 Score = 237 bits (262), Expect = 4e-60 Identities = 311/414 (75%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | ||||||||| ||||||||||| |||| | ||||| | Sbjct 2349 CCACAACTCAT-CCGCTGA-TTTTTCAACATCAGTCGGTTCGGACCTCGACTTAGTT-TC 2405 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 2406 ACCTAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 2461 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | | |||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 2462 GACAATA-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 2519 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 2520 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCCTCAGC 2578 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | ||||||||||||||| | | ||||| Sbjct 2579 TC-CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGC-CGGGGGT 2636 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||| Sbjct 2637 TCTTTTCACCTTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCT 2696 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || |||| ||||| || | ||||||| Sbjct 2697 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTTCACGTGCCCCATGCTACTCG 2750 >seq139 Length=3453 Score = 237 bits (262), Expect = 4e-60 Identities = 311/414 (75%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | ||||||||| ||||||||||| |||| | ||||| | Sbjct 2481 CCACAACTCAT-CCGCTGA-TTTTTCAACATCAGTCGGTTCGGACCTCGACTTAGTT-TC 2537 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 2538 ACCTAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 2593 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | | |||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 2594 GACAATA-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 2651 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 2652 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCCTCAGC 2710 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | ||||||||||||||| | | ||||| Sbjct 2711 TC-CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGC-CGGGGGT 2768 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||| Sbjct 2769 TCTTTTCACCTTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCT 2828 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || |||| ||||| || | ||||||| Sbjct 2829 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTTCACGTGCCCCATGCTACTCG 2882 >seq145 Length=3426 Score = 214 bits (236), Expect = 4e-53 Identities = 283/376 (75%), Gaps = 14/376 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | ||||||||| ||||||||||| |||| | ||||| | Sbjct 2480 CCACAACTCAT-CCGCTGA-TTTTTCAACATCAGTCGGTTCGGACCTCGACTTAGTT-TC 2536 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 2537 ACCTAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 2592 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | | |||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 2593 GACAATA-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 2650 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 2651 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCCTCAGC 2709 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | ||||||||||||||| | | ||||| Sbjct 2710 TC-CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGC-CGGGGGT 2767 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| |||||||||||||||||| || | |||||||||| | || | || |||| || Sbjct 2768 TCTTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCT 2827 Query 367 TGGAGGATGGTCCCCC 382 | |||| ||||||||| Sbjct 2828 TAGAGGGTGGTCCCCC 2843 >seq141 Length=3427 Score = 214 bits (236), Expect = 4e-53 Identities = 283/376 (75%), Gaps = 14/376 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | ||||||||| ||||||||||| |||| | ||||| | Sbjct 2481 CCACAACTCAT-CCGCTGA-TTTTTCAACATCAGTCGGTTCGGACCTCGACTTAGTT-TC 2537 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 2538 ACCTAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 2593 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | | |||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 2594 GACAATA-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 2651 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 2652 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCCTCAGC 2710 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | ||||||||||||||| | | ||||| Sbjct 2711 TC-CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGC-CGGGGGT 2768 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| |||||||||||||||||| || | |||||||||| | || | || |||| || Sbjct 2769 TCTTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCT 2828 Query 367 TGGAGGATGGTCCCCC 382 | |||| ||||||||| Sbjct 2829 TAGAGGGTGGTCCCCC 2844 >seq140 Length=3295 Score = 214 bits (236), Expect = 4e-53 Identities = 283/376 (75%), Gaps = 14/376 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | ||||||||| ||||||||||| |||| | ||||| | Sbjct 2349 CCACAACTCAT-CCGCTGA-TTTTTCAACATCAGTCGGTTCGGACCTCGACTTAGTT-TC 2405 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 2406 ACCTAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 2461 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | | |||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 2462 GACAATA-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 2519 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 2520 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCCTCAGC 2578 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | ||||||||||||||| | | ||||| Sbjct 2579 TC-CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGC-CGGGGGT 2636 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| |||||||||||||||||| || | |||||||||| | || | || |||| || Sbjct 2637 TCTTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCT 2696 Query 367 TGGAGGATGGTCCCCC 382 | |||| ||||||||| Sbjct 2697 TAGAGGGTGGTCCCCC 2712 >seq17439 Length=278 Score = 122 bits (134), Expect = 2e-25 Identities = 167/222 (75%), Gaps = 11/222 (5%) Strand=Plus/Minus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || ||||||| ||||| || | ||||||||| | ||||||| ||||||||| | Sbjct 213 CCTATCCACAAGTCATCCCAGAA--TTTTTCAACATTCACGGGTTCGGACCTCCAGTTGG 156 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | ||||||||||||| || ||||| ||| ||||||||| || |||| |||||| | Sbjct 155 T-GTTACCCAACCTT-CATCCTGCTCAT-GGATAGATCACCTAGTTT-CGGGTCGTCATG 100 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAA 182 | | ||| |||| ||| | | ||||||||| |||||||||| | |||| | |||| Sbjct 99 CAACGAACTTAACGCTCTATTCAAACTCGCTTT-CGCTACGCCTACACCTAACGGCTTAA 41 Query 183 GCTTTGCCACTGAAAAT-AAGTCGCTGACCCATTATACAAAA 223 |||| | | | | || |||||||||||||||||||||||| Sbjct 40 GCTTG--CTCGGCACATGAAGTCGCTGACCCATTATACAAAA 1 >seq143 Length=3452 Score = 102 bits (112), Expect = 2e-19 Identities = 102/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| ||||||| | |||||||||| Sbjct 2741 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCC-TAAATAGGGTTCTTTT 2799 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 2800 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 2859 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 2860 GTGGTCCCCC 2869 >seq142 Length=3451 Score = 102 bits (112), Expect = 2e-19 Identities = 102/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| ||||||| | |||||||||| Sbjct 2740 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCC-TAAATAGGGTTCTTTT 2798 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 2799 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 2858 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 2859 GTGGTCCCCC 2868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1240673033856