Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq60294 215 1e-53 seq60293 215 1e-53 seq20040 205 2e-50 seq20037 205 2e-50 seq8265 154 3e-35 seq20039 136 8e-30 seq20038 136 8e-30 seq66240 111 3e-22 >seq60294 Length=3854 Score = 215 bits (238), Expect = 1e-53 Identities = 233/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | ||||| ||||||||||||||||||||| Sbjct 502 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAATATTCCCCACTGCTGCCTCCCGTAG 443 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||| ||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 442 GAGTCTGGGCCTTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 383 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| ||||||| ||||||||||| |||||| | ||| ||||| || || Sbjct 382 CATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCAAGCCCCTCCTTGG 323 Query 181 G-CGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 | ||| || || || || ||||| | | || | ||||||||| Sbjct 322 GTGGATTCCTCCTT--TC----------GC--TCCTCAGCC--TACGGGGTATTAGCAGC 279 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| | || ||| || |||||||| || ||| |||||||||||||||| Sbjct 278 CGTTTCCAGCTGTTGTCCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 220 Query 300 CCACT 304 ||||| Sbjct 219 CCACT 215 >seq60293 Length=4317 Score = 215 bits (238), Expect = 1e-53 Identities = 233/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | ||||| ||||||||||||||||||||| Sbjct 502 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAATATTCCCCACTGCTGCCTCCCGTAG 443 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||| ||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 442 GAGTCTGGGCCTTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 383 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| ||||||| ||||||||||| |||||| | ||| ||||| || || Sbjct 382 CATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCAAGCCCCTCCTTGG 323 Query 181 G-CGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 | ||| || || || || ||||| | | || | ||||||||| Sbjct 322 GTGGATTCCTCCTT--TC----------GC--TCCTCAGCC--TACGGGGTATTAGCAGC 279 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| | || ||| || |||||||| || ||| |||||||||||||||| Sbjct 278 CGTTTCCAGCTGTTGTCCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 220 Query 300 CCACT 304 ||||| Sbjct 219 CCACT 215 >seq20040 Length=3849 Score = 205 bits (226), Expect = 2e-50 Identities = 227/299 (76%), Gaps = 18/299 (6%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 496 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 437 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| |||||| | || ||||| |||| ||| Sbjct 436 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGC 377 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAG-CGAT 185 |||||| ||||||| ||||||||||| |||||| | ||| ||||| || || | ||| Sbjct 376 CTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCAAGCCCCTCCTTGGGTGGAT 317 Query 186 AAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTC 245 || || || || ||||| | | || | ||||||||| |||||| Sbjct 316 TCCTCCTT--TC----------GC--TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTC 273 Query 246 CAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || ||| | || ||| || |||||||| || ||| ||||||||||||||||||||| Sbjct 272 CAGCTGTTGTCCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCGCCACT 215 >seq20037 Length=4312 Score = 205 bits (226), Expect = 2e-50 Identities = 227/299 (76%), Gaps = 18/299 (6%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 496 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 437 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| |||||| | || ||||| |||| ||| Sbjct 436 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGC 377 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAG-CGAT 185 |||||| ||||||| ||||||||||| |||||| | ||| ||||| || || | ||| Sbjct 376 CTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCAAGCCCCTCCTTGGGTGGAT 317 Query 186 AAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTC 245 || || || || ||||| | | || | ||||||||| |||||| Sbjct 316 TCCTCCTT--TC----------GC--TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTC 273 Query 246 CAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || ||| | || ||| || |||||||| || ||| ||||||||||||||||||||| Sbjct 272 CAGCTGTTGTCCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCGCCACT 215 >seq8265 Length=277 Score = 154 bits (170), Expect = 3e-35 Identities = 196/268 (73%), Gaps = 19/268 (7%) Strand=Plus/Minus Query 45 CTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCT 104 |||||||||||||||||||||||| |||||||||||| ||| |||| | | ||| ||||| Sbjct 277 CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCT 218 Query 105 CAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCC 164 ||| || | ||| |||||||| ||||||| || ||| ||||||||| | |||||| | | Sbjct 217 CAGACCAGTTACAGATCGTCGCCTTGGTGAGCCTTTACCTCACCAACAAGCTAATCTGAC 158 Query 165 GCGAGCCCATCTTTCAGCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCT------- 217 | || ||||| |||| | |||| ||| ||| || ||| | Sbjct 157 ATGGGCTCATCTGATAGCGGGA-------GGTC--CGAA-GATCCCCCCCTTTCCCCCGT 108 Query 218 -GACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTG 276 | |||||||||||||||||| |||| ||||||| | || | || |||||| || Sbjct 107 AGGGCGTATGCGGTATTAGCGTTCCTTTCGAAACGTTGTCCCCCACTACCAGGCAGATT- 49 Query 277 CTCACGTGTTACTCACCCGTCCGCCACT 304 | || || |||||||||||| |||| || Sbjct 48 CCCATGTATTACTCACCCGTTCGCCGCT 21 >seq20039 Length=4276 Score = 136 bits (150), Expect = 8e-30 Identities = 122/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 460 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 401 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 400 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 341 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| || |||||||||||||| Sbjct 340 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 308 >seq20038 Length=3813 Score = 136 bits (150), Expect = 8e-30 Identities = 122/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 460 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 401 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 400 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 341 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| || |||||||||||||| Sbjct 340 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 308 >seq66240 Length=294 Score = 111 bits (122), Expect = 3e-22 Identities = 177/254 (70%), Gaps = 19/254 (7%) Strand=Plus/Plus Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 || |||||||||||| ||| |||||||| ||| |||||||| ||||||||| || | | Sbjct 1 GGACCGTGTCTCAGTTCCAGTGTGGCCGATCATCCTCTCAGACCGGCTACCCGTCTTAGC 60 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCG--- 183 |||||||||| ||| ||||||||||| || || |||||||| | | ||| |||| Sbjct 61 CTTGGTGGGCCGTTACCTCACCAACTAGCTGATAGGCCGCGAACTCCTCTCCTAGCGTCG 120 Query 184 -----------ATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTAT 232 ||||||| ||| | | | | |||| || |||||||||| Sbjct 121 GGCCTTGCGGTCCCCGACTTTGGTATGAGACTCAGGAGAGCCTC-AACCGTATGCGGTAT 179 Query 233 TAGCGTTCG--TTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTC 290 || |||| |||| | |||||| | || ||| || ||| ||||||||||| | Sbjct 180 TA--ATTCGCCTTTCGGCGAGCTATTCCCCACTTGGAGGTAGATTGTTCACGTGTTACGC 237 Query 291 ACCCGTCCGCCACT 304 |||||| ||||||| Sbjct 238 ACCCGTTCGCCACT 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997654604544