Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq144 203 8e-50 seq140 203 8e-50 seq146 167 5e-39 seq145 167 5e-39 seq143 167 5e-39 seq142 167 5e-39 seq141 167 5e-39 seq139 167 5e-39 seq34831 152 1e-34 seq33254 149 1e-33 >seq144 Length=3321 Score = 203 bits (224), Expect = 8e-50 Identities = 300/411 (73%), Gaps = 22/411 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || |||| |||| | ||| ||| || | Sbjct 1740 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTAACCCTCCGTGGACGAACCTGGCG 1799 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 |||| |||| | | |||| | | |||||| |||| | || |||||| ||| Sbjct 1800 GAGGAATCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTTCGTTACTCAAGCCG 1859 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAG-TCACCCGGCAGCTTCACCACTGACA 176 ||||||| || ||| || |||| || | | || | ||| |||| || | Sbjct 1860 ACATTCTCGCTTCCGCTTCG--TCCA--ACCCTGCTCGCGCGGGTACTTCTTT-CTAAGG 1914 Query 177 CG--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAA 230 || ||||||||||||| | || ||| | ||||||||||||| ||| |||| Sbjct 1915 CGGAACGCTCCCCTACCGATTCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA- 1970 Query 231 GCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 |||||| | ||| ||||||| | | || || ||||||||||||||||||||||| || Sbjct 1971 GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTGAA 2029 Query 291 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCC-ACATCCTTTCCCAC 349 || |||||||||| | || |||||||||| ||||| || ||||| || ||||| ||| Sbjct 2030 GGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGC-ACTCCTACCGCCTTTATCAC 2088 Query 350 TGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 |||| | || |||||||||||||||| ||||||||||||||||||||||| Sbjct 2089 TGAGCGATCATTTAGGGGCCTTAGCTGGTGATCTGGGCTGTTTCCCTCTCG 2139 >seq140 Length=3295 Score = 203 bits (224), Expect = 8e-50 Identities = 300/411 (73%), Gaps = 22/411 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || |||| |||| | ||| ||| || | Sbjct 1740 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTAACCCTCCGTGGACGAACCTGGCG 1799 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 |||| |||| | | |||| | | |||||| |||| | || |||||| ||| Sbjct 1800 GAGGAATCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTTCGTTACTCAAGCCG 1859 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAG-TCACCCGGCAGCTTCACCACTGACA 176 ||||||| || ||| || |||| || | | || | ||| |||| || | Sbjct 1860 ACATTCTCGCTTCCGCTTCG--TCCA--ACCCTGCTCGCGCGGGTACTTCTTT-CTAAGG 1914 Query 177 CG--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAA 230 || ||||||||||||| | || ||| | ||||||||||||| ||| |||| Sbjct 1915 CGGAACGCTCCCCTACCGATTCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA- 1970 Query 231 GCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 |||||| | ||| ||||||| | | || || ||||||||||||||||||||||| || Sbjct 1971 GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTGAA 2029 Query 291 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCC-ACATCCTTTCCCAC 349 || |||||||||| | || |||||||||| ||||| || ||||| || ||||| ||| Sbjct 2030 GGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGC-ACTCCTACCGCCTTTATCAC 2088 Query 350 TGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 |||| | || |||||||||||||||| ||||||||||||||||||||||| Sbjct 2089 TGAGCGATCATTTAGGGGCCTTAGCTGGTGATCTGGGCTGTTTCCCTCTCG 2139 >seq146 Length=3452 Score = 167 bits (184), Expect = 5e-39 Identities = 153/192 (80%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | |||||| |||| || ||| || ||||||| Sbjct 2082 GCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 2138 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 2139 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 2198 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 2199 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 2258 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 2259 GTTTCCCTCTCG 2270 >seq145 Length=3426 Score = 167 bits (184), Expect = 5e-39 Identities = 153/192 (80%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | |||||| |||| || ||| || ||||||| Sbjct 2082 GCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 2138 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 2139 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 2198 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 2199 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 2258 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 2259 GTTTCCCTCTCG 2270 >seq143 Length=3452 Score = 167 bits (184), Expect = 5e-39 Identities = 153/192 (80%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | |||||| |||| || ||| || ||||||| Sbjct 2083 GCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 2139 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 2140 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 2199 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 2200 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 2259 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 2260 GTTTCCCTCTCG 2271 >seq142 Length=3451 Score = 167 bits (184), Expect = 5e-39 Identities = 153/192 (80%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | |||||| |||| || ||| || ||||||| Sbjct 2082 GCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 2138 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 2139 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 2198 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 2199 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 2258 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 2259 GTTTCCCTCTCG 2270 >seq141 Length=3427 Score = 167 bits (184), Expect = 5e-39 Identities = 153/192 (80%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | |||||| |||| || ||| || ||||||| Sbjct 2083 GCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 2139 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 2140 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 2199 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 2200 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 2259 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 2260 GTTTCCCTCTCG 2271 >seq139 Length=3453 Score = 167 bits (184), Expect = 5e-39 Identities = 153/192 (80%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | |||||| |||| || ||| || ||||||| Sbjct 2083 GCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 2139 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 2140 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 2199 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 2200 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 2259 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 2260 GTTTCCCTCTCG 2271 >seq34831 Length=316 Score = 152 bits (168), Expect = 1e-34 Identities = 147/189 (78%), Gaps = 5/189 (3%) Strand=Plus/Minus Query 213 CTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGA-----CCAG 267 ||||||| || ||| ||||||| ||||| ||| ||| | | ||||| |||| Sbjct 250 CTTCGGCATATGGCTTTAGCCCCGTTACATCTTCGCCGCAAGACCTCTTGATTAGACCAG 191 Query 268 TGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTAC 327 |||||| |||||| ||||| ||||||||||||||| |||||||||||||||||||| | Sbjct 190 TGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTCAAT 131 Query 328 GCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGC 387 |||| ||||||| ||||||||| || || | || |||||||||| || | | ||| Sbjct 130 GCAATCCCACATCGTTTCCCACTTAGCCATAATTTGGGGGCCTTAGATGTAGGTTAGGGT 71 Query 388 TGTTTCCCT 396 ||||||||| Sbjct 70 TGTTTCCCT 62 >seq33254 Length=261 Score = 149 bits (164), Expect = 1e-33 Identities = 135/170 (79%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 227 TTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTT 286 || ||||||| ||||| || |||| | ||| ||| ||||||||||||||| |||| Sbjct 256 TTGAGCCCCGTTACATCTTCCGCGCAGGCCGACTCGACTAGTGAGCTATTACGCTTTCTT 197 Query 287 TCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCC 346 | |||| |||||||||| ||||||||||||| | |||||| || ||||||| ||||| Sbjct 196 TAAAGGGTGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTAAGCCTTCCCACATCGTTTCC 137 Query 347 CACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 |||| | || |||| ||| |||||||||| | |||||| ||||||||| Sbjct 136 CACTTAACCATGACTTTGGGACCTTAGCTGACGGTCTGGGTTGTTTCCCT 87 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176720815616