Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq60293 123 2e-26 seq20039 123 2e-26 seq20037 123 2e-26 seq60294 96.9 3e-18 seq20040 96.9 3e-18 seq20038 96.9 3e-18 >seq60293 Length=4317 Score = 123 bits (136), Expect = 2e-26 Identities = 124/160 (78%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | | Sbjct 1818 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 1760 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| |||| | |||||||| ||||||| |||| |||||||||||||| Sbjct 1759 CCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 1700 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | |||||||||||||||||||||||||||| || | |||| Sbjct 1699 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCAC 1660 >seq20039 Length=4276 Score = 123 bits (136), Expect = 2e-26 Identities = 124/160 (78%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | | Sbjct 1777 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 1719 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| |||| | |||||||| ||||||| |||| |||||||||||||| Sbjct 1718 CCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 1659 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | |||||||||||||||||||||||||||| || | |||| Sbjct 1658 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCAC 1619 >seq20037 Length=4312 Score = 123 bits (136), Expect = 2e-26 Identities = 124/160 (78%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | | Sbjct 1813 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 1755 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| |||| | |||||||| ||||||| |||| |||||||||||||| Sbjct 1754 CCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 1695 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | |||||||||||||||||||||||||||| || | |||| Sbjct 1694 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCAC 1655 >seq60294 Length=3854 Score = 96.9 bits (106), Expect = 3e-18 Identities = 118/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| |||||||||| ||| | ||| || |||||| |||| |||| Sbjct 1401 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGAAGTTAGCTTACCCTTGCGG 1342 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| ||| ||| |||||||| ||||||| |||| | |||||| || Sbjct 1341 GGTCGCGATCCTTTGTCCCGTCCATTGTAACACGTGTGTCGCCCAGGGCCAAAGGGC-AT 1283 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 1282 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 1243 >seq20040 Length=3849 Score = 96.9 bits (106), Expect = 3e-18 Identities = 118/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| |||||||||| ||| | ||| || |||||| |||| |||| Sbjct 1396 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGAAGTTAGCTTACCCTTGCGG 1337 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| ||| ||| |||||||| ||||||| |||| | |||||| || Sbjct 1336 GGTCGCGATCCTTTGTCCCGTCCATTGTAACACGTGTGTCGCCCAGGGCCAAAGGGC-AT 1278 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 1277 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 1238 >seq20038 Length=3813 Score = 96.9 bits (106), Expect = 3e-18 Identities = 118/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| |||||||||| ||| | ||| || |||||| |||| |||| Sbjct 1360 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGAAGTTAGCTTACCCTTGCGG 1301 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| ||| ||| |||||||| ||||||| |||| | |||||| || Sbjct 1300 GGTCGCGATCCTTTGTCCCGTCCATTGTAACACGTGTGTCGCCCAGGGCCAAAGGGC-AT 1242 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 1241 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 1202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415699124230